Raphanus sativus (radish): 108863531
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Entry
108863531 CDS
T06014
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108863531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108863531
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108863531
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108863531
Atg1 complex
108863531
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108863531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
DUF6964
Motif
Other DBs
NCBI-GeneID:
108863531
NCBI-ProteinID:
XP_018493488
UniProt:
A0A6J0PA16
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDFPENLPDMGRLEQIVSHFFPKALHIILDSRIPSLQSRVGVRSRDRPNLKKSDKWFNLV
MGDRPAALEKLHSWHRNVLDSMIIDIILIHPNHDDETVIERWVVQYENPLIMSPQSSDPR
YQKVYKKAIILLRSLHAQTRLLPAYRASRQLSSSLASSSSSGYEMVYKVSSFSDVFSPPV
TETMKEFRFTPVEVPPGRLCVSVTYRSDLSDFNLGAHITLPPRIITDYVGSPATDPMRFF
PSPGQSFEGASFQGRRRPPLTTERPHSWSSGFQRPPTPNQSFSPQFSPDFFHSSRTDGGY
GYGGDSHHQLSPPFSPSGSPSTPRRISVRPGTAPVTIPSSATFNRYVSSSSNFSEPSRNP
LPPFSPKSTRRSPSSQDSLPGIALYKSSRSGESPSGGLMNHYPGHKLTKDSKYDSGRFSG
LLSSSGSPRFGFSRSPSRLSSQDDLDDPDCSCPFDFDDVDESGLQYSQSLDRRKTSSSIS
QSLPIGRKSQDAAVGVLVQMLKTAPPLRQDSSTYMASMSGVQREGTESEFSMARSTSDAL
EELRNYKQLKDLLLSKSKSFGGETRVH
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggattttccagagaatctaccagacatgggaagattagagcagatcgtatctcacttc
ttccccaaggcactccacatcatcctcgactccagaatcccttccttacaatcccgcgtc
ggcgtccgttcccgcgaccgccctaacctcaaaaagagcgataaatggttcaatctcgtc
atgggagaccgtcccgccgcgctggagaaactgcattcttggcataggaacgtattagac
tcaatgatcatcgacatcatcctcatccatcccaaccacgacgacgagactgtgatcgag
cggtgggttgttcaatacgagaacccgctaatcatgtctcctcagagctcagatcctcgt
taccagaaggtttacaagaaagccatcatcctcctccgctctctccacgcgcagactcgc
cttctccccgcctaccgagcctccaggcagctcagctcctctctcgcttcctcctcctct
tcaggttacgagatggtctacaaggtttcgtctttcagcgacgtcttctctcctcccgtc
actgagaccatgaaagagttccgctttacccccgtcgaagtgcctccggggcgtctctgc
gtttctgttacttaccgttcagacttgtctgacttcaacctcggagctcacatcactctg
cctcccaggattataaccgattacgtcgggagccccgcgacggatcctatgaggttcttc
ccttctccagggcagagctttgaaggtgcttcttttcaaggtagacggcggcctccgttg
actactgaacgtccgcatagctggagtagcggctttcaaagacctcctacgccgaaccag
tctttctcccctcagttttcacctgattttttccactcgtcacgtactgatggtggttat
ggttatggtggtgacagtcatcaccagctttcgcctcctttttcgccgtcgggttctcct
tctactccgaggaggattagtgtgaggcctggaactgctccagtgaccattccttcttcg
gctacgttcaatagatacgtttcgtcatcgtctaacttctctgagccgagtaggaatcct
ctccctcctttttcccctaaaagcaccagacgctccccttcctcgcaggactctttgcct
gggattgctttgtacaagagttccagaagcggagagtctccttctggtggattaatgaac
cactaccctggccacaagctgacgaaggacagcaaatatgattcaggccggttctctgga
ctgctgtcttcaagtggctcaccaagattcgggttttctaggagccccagtagattatct
tcccaagacgatttggatgaccctgattgctcatgcccttttgatttcgatgatgttgac
gagtctggacttcagtacagccaaagtcttgaccggaggaaaacttcaagctctatatca
cagtcgctacctatagggaggaagtcacaggacgcagcggttggagtcctggttcagatg
ctaaagacagcaccgccattacgacaagactcgagcacttacatggcgtcaatgtctggg
gttcagagagaaggcacagaatctgaattttccatggctcgaagtacatcagatgcgcta
gaggaactgagaaattacaagcagctcaaagacttgcttctctccaaatccaagagtttt
ggtggtgagactcgtgttcactga
DBGET
integrated database retrieval system
