KEGG   Raphanus sativus (radish): 108863554
Entry
108863554         CDS       T06014                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108863554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108863554
   03041 Spliceosome [BR:rsz03041]
    108863554
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108863554
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108863554
Spliceosome [BR:rsz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108863554
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 MgtE_N
Other DBs
NCBI-GeneID: 108863554
NCBI-ProteinID: XP_018493519
UniProt: A0A6J0PA47
LinkDB
Position
5:complement(30130122..30132295)
AA seq 414 aa
MDMLKKRRLDENGIGLLLNNDGHVTTTISTRLTPHDARKLIDRFSTDQLLDVLQEAVARH
PDVLDLVRSTADSDVSLRKLFIRGLAAETTTESLRSLFSGYGDLDEAVVILDKVTAKSKG
YGFVTFKHADGALLALKDPSKKIDGRVTVTQLAAAGNQGGTGTAAGAGGRVSSDVSTRKI
YVANVPFDMPADRLLNQFLAYGDIEEGPLGFDKVTGKSRGFALFVYKTCEGAQAALADPT
KVVDGKHLQCKLAIDGKKGKPQGQDGGAGVGGHGGHGDGPGPYNHGGPGGMGPYGGYAGG
PPPYHLNSTPASMGGGGGAGGGGYGGAYAGHYSGYGGAGSGGYGSMGGGYGGPGAGSGPY
RMPPSSMSGGGYPESGHYGHSSASAYPGQHPPVGASPVPRVPLGGMYPNGAPNY
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggatatgctgaagaagcgacgtctcgacgagaacggcatcggtctcctcctcaacaac
gacggacacgtcaccacaacaatctcgacccgactgaccccgcacgacgctcggaagctc
atcgaccgattctccaccgaccagctcctcgacgtcctgcaagaggccgtcgcccggcac
cccgacgtcctcgatctcgtcagatcgaccgccgactccgacgtctccttgaggaagctc
ttcatccgcggcctcgcggcggagacgacgacggagagtctccgatcgctcttctccggc
tacggagacctcgacgaagccgtcgtgatcctcgacaaggtcacggcgaaatcgaaaggg
tacgggttcgtgacgttcaagcacgcggacggagctctcctcgctctcaaggatccgtct
aagaagatcgacgggcgcgtgactgtcacgcagctcgctgcggctgggaatcaaggtggg
acggggacggcggcgggggcggggggtcgtgtttcttcggatgtatcgacgaggaagata
tacgtggcgaatgtgccgtttgatatgcctgcggataggttgttgaatcagtttcttgct
tatggagatattgaggaaggtcctttgggttttgataaagtcacggggaagtcacgtggg
tttgctttgtttgtttataagacttgtgaaggtgctcaggcggcgcttgctgatcccacg
aaggtggttgatgggaagcatctgcagtgtaagttggctatagatgggaagaaaggaaag
ccgcagggacaagatggtggcgctggggttggagggcatggtggtcacggtgatggtcct
ggaccttataatcacggtggacctggtgggatgggtccttacggtggatacgcgggagga
ccaccgccgtatcacttgaactccacgccagcttctatgggtggtggtggtggtgctgga
ggaggtggttatggaggtgcatatgctggtcattatagtggatatggtggtgcaggatct
gggggttatggatcaatgggtggtggttatggtgggccaggtgctggaagtggtccgtat
agaatgccgccgagttctatgtctggtggtggttatccagagagtgggcattatgggcat
tcgtcagcttctgcgtatcctggacagcatccgcctgttggtgcctccccagtgccaaga
gttcctcttggaggaatgtaccccaacggtgcaccaaattactga

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