Raphanus sativus (radish): 108863613
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Entry
108863613 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108863613
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108863613
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108863613
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108863613
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108863613
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108863613
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108863613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_DHX29
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
108863613
NCBI-ProteinID:
XP_018493605
UniProt:
A0A6J0PAJ4
LinkDB
All DBs
Position
5:complement(8959645..8964639)
Genome browser
AA seq
798 aa
AA seq
DB search
MELLRSNLARVQIPEPTHRIYKHECCLSFDTPRSEGGLFVDMNSFLAFGKEYVAWNHEKT
GNPVYLHIKETPKSVPEDRPLKKPTLLAIGVDGGFGNNETEYEESYSIVILPDFVSLPFP
SVELPEKVRIAVDTVLSAVGAERIEQVAAWTAEDKKASEHALTLQQMKSGVVIPPSGWKC
AKCDKKENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETGYPLAVKLGTITADLEAAD
VYSYPEDDSVLDPLLAQHLAHFGIDFSSMQKTEMTTAERELDQNTNFDWNRIQESGKELV
PVFGPGYTGLVNLGNSCYLAATMQILFSTHSFISRYYSHQSLKLAFETAPADPTLDLNMQ
LTKLGHGLLSGKYSIPVTEKDAATGDARQEGIPPRMFKSVVAAGHAEFSSMRQQDALDFF
LHLLDKVERGNNTRSDLDPTRSFKFGVEEKILCSSGKVSYNKREDCILSLNIPLQEATNK
DELEAFNNQKAGQGLEENNMSTDEIVRPRVPLEACLATFASPEQIHDYYSTALKGKTTAI
KTTGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDVIDISHMRSKGLQPGEELLPDS
VPEEVMESAQPVANEEIVTQLVSMGFNQLHCQKAAINTSNAGVEEATNWLFSHMDDPDID
APISNQTSDVDQSSVDTLISFGFAEEVARKALKASGGDIEKATDWIFNNPNASVSDMDVS
SSSSAQTPAESGLLPDGGGRYKLFGIVSHMGTSTHCGHYVAHILKEGRWVIFNDSKVGVS
TDPPKDMGYLYFFQRLDN
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagcttctccgatccaacctggctagggttcagatcccagaacccactcatcgcatc
tacaagcatgagtgctgcctctccttcgacactccgagatcggaaggaggattgttcgtg
gacatgaacagtttccttgctttcggaaaagagtacgttgcttggaatcacgagaagact
gggaatcctgtttatctccacatcaaggagactcccaagtctgttcccgaggatcgccct
ctcaagaaacctactcttctcgctataggagtagatggcggatttggcaacaatgagact
gagtatgaggaatcttatagcatagtcatccttcctgactttgtttcacttccttttccc
tctgttgaactcccagagaaggtgaggattgcggttgatactgtactgagtgcggtaggt
gctgagcggatagagcaagttgcagcttggacagctgaggacaagaaagctagtgagcat
gcgttgacgctgcagcagatgaagagcggcgttgtcattcctccctctggatggaagtgt
gccaagtgtgataagaaggagaatctctggcttaatcttacggatgggatgattctatgt
ggaaggaagaactgggatgggactggcggaaacaaccatgcggttgagcactataaggaa
acaggataccctcttgctgttaagcttgggactatcaccgctgacttggaagcagcagat
gtttattcctatccagaagatgacagtgttttggacccgctcctggctcagcatctggcc
cattttggaatcgacttctcctccatgcagaagacagaaatgactactgctgaaagagaa
cttgatcaaaatacgaattttgactggaaccgtatacaagagagtggaaaagaattggta
ccagtttttggacctggatataccggacttgtcaatcttgggaacagttgctacttggca
gctacgatgcagattcttttctcgacccattcatttatttcaagatactattcacatcag
agcttaaagttggcatttgagacggctcctgctgatccaactttggacctcaatatgcaa
ttgacaaagcttggacatggtttactatctgggaagtactctattcctgtaacagagaag
gatgctgcaactggagatgctagacaagaaggaatacctcctcgcatgttcaaatcggta
gttgctgcaggccatgcagaattctcttctatgagacagcaggatgctcttgactttttt
ctccacttgctagacaaagttgagcgtggcaacaacacgagatcagatttagaccccacg
aggagcttcaagtttggagtagaagagaagatactttgttcatctggaaaggtctcttat
aataagagggaagactgtattctttctttgaacattccgttgcaggaggcaactaataaa
gatgaactagaagccttcaacaaccagaaagcaggtcaaggactggaagaaaataatatg
tcaactgatgaaattgtacgcccacgagttcctttagaagcttgtctagcaacgtttgca
tcaccagagcagattcatgattactacagcactgctctgaagggaaagacaacagctatc
aagacaactggtttgacatctttcccagattacttggtcttgcacatgcggaagtttgtt
atggaggcaggctgggtgccaaagaaacttgatgtgtacattgatgttccggatgtaatt
gatatcagccacatgcgcagcaaagggcttcaacctggagaagaactgttgccagatagc
gttccagaagaagtgatggaatcagcacagcctgtggcaaatgaggagatagttacacaa
ctcgtctcaatgggatttaaccagcttcattgccagaaagccgccataaatacgtctaat
gctggggttgaagaggcgacgaactggttattttctcacatggatgatccagatatcgac
gcaccaatctccaatcagacatctgacgttgatcaatcaagcgttgataccttaatctcc
tttggttttgctgaagaggttgctcgaaaggcactcaaagcctcgggaggagatattgag
aaggcaacagattggatattcaacaaccctaatgcatctgtttcagacatggacgtttcc
tccagcagttcagctcaaactccagctgaaagtggattattaccagacgggggagggaga
tacaagctgtttgggatagtaagccatatgggaacatcaacacactgtggtcactatgtg
gcacacatattgaaagaaggtcgttgggttatattcaatgacagcaaagtaggtgtctcg
acagatcctcctaaagacatgggttatctctacttctttcagcgtctcgacaattga
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