Raphanus sativus (radish): 130494304
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Entry
130494304 CDS
T06014
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130494304
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130494304
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130494304
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
130494304
NCBI-ProteinID:
XP_056859614
UniProt:
A0A9W3D757
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Position
2:complement(37519455..37522248)
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AA seq
605 aa
AA seq
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MNFEGRREERRMKIVSYNVNGLRQRVSQFESLLKLLDSFDADIICFQETKLRRQELTADL
TIAQGYESFFSCTRTCEKGRTGYSGVATFCRVKSATSSCEAALPVAAEEGFTGLVNGGGK
KNDTSCVIAQGLEEYDKEELLRIDQEGRCVITDHSHFVVFNVYGPRAVADDAERIEFKHR
FYDVLERRWECLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEFRKWFRSLLVERGGS
FSDVFRSKHPERRDAFTCWSSSSGAEQFNYGSRIDHILVAGPCLHEEGDQQGHSFLACHV
KECDILTEYKRFKNETVPTRWKGGLGVKLKGSDHVPVFTSFDDLPDIPQHSTPPLASRYL
PMIYGFQQTLASVLMKRQANEQAKAIEVSCSSSSQSCGEISTVPLRNCSLTGTSPEESCS
SEKESTVRVTTTSGGSTSNLSDRMCVSSVRAEDISRDGNRKKVRRIQSSSQQLSLKSFFT
SKSPSNFSSSQSSSQGESITEPTVSGKEDDELTTTSSQEQDQSGSSTKQKNDAALMEWQR
IQNLMRNSIPLCKGHKEACVARVVKKPGPTFGRRFYVCSRAEGPSSNPEANCGYFKWASS
KFRDK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaaggaagaagagaggagaggaggatgaagatagtgagttacaacgtgaat
ggcctcagacaacgagtttctcagttcgaatccctcctgaaactcctcgattccttcgac
gccgatatcatctgcttccaggaaacgaagctgaggagacaagaactaacagcggattta
acgatagcccaaggctacgaatccttcttctcgtgcactcgcacgtgcgagaaaggtcgt
actggttactctggtgtagcaacgttctgcagggtaaagtcagcaacttcaagctgtgaa
gctgctttgcctgttgctgctgaagaaggattcactggtcttgtaaacggaggtgggaag
aagaatgatacttcttgtgttattgctcaaggtcttgaggagtatgacaaagaagagctt
cttaggattgaccaagagggtcgttgcgttattactgatcactcccactttgttgttttt
aatgtctatggaccgcgagctgtagctgatgatgctgagaggattgagtttaagcatcgc
ttctatgatgttttagagagaaggtgggaatgtcttttgcgtcaaggaagaagggtattt
gttgttggggatctcaacattgctccttttgctatggatcgatgtgaagctggccctgat
ttcgagaaaaacgagttcagaaaatggtttagatctctcctagttgaacgtggtggctcc
ttctctgacgttttcagatctaaacatcctgaaaggagagatgcattcacatgttggtct
tcaagtagtggagcagaacagtttaattacggttcgagaattgatcatattttagttgct
ggaccatgcttgcatgaagaaggagatcagcagggccatagttttttagcttgtcatgtg
aaggaatgtgacatattaacagagtacaagcggtttaagaatgaaactgtgccaacaagg
tggaaaggtggattgggtgtgaaactaaagggatcagaccatgtacctgtattcacaagt
tttgatgatttgcctgacatcccccaacacagcacaccgcctttagcttcgagatatctt
cccatgatttacggttttcagcaaactcttgcgtcagtgttaatgaaaagacaagccaat
gagcaagccaaagccattgaggtatcatgttcatcatcaagtcaaagttgtggagagatc
tctacagtaccactcagaaactgcagcttgacgggtacttcacctgaggaatcttgctct
tcggagaaagaatccactgtgagagtaaccaccacatctggaggctccactagtaacctt
agtgatagaatgtgtgtgtcatctgtgagagctgaggatatctctagagatggaaacagg
aagaaagtgaggaggatccaatcttcttctcaacagctttctctaaagtcctttttcact
tctaaatcaccttcaaatttttcctcaagccagagctcctcccaaggagagagcatcaca
gaaccgactgtttccggcaaagaagacgatgaacttactactacttcatcacaggaacaa
gatcaaagcggttcatctactaaacagaaaaacgatgcagcattaatggagtggcagaga
atacagaaccttatgcgaaacagcatacctctctgcaaaggacacaaagaagcttgtgta
gctcgggttgtaaagaaaccaggtcccacatttggacgcagattctacgtctgctctcgt
gctgagggaccttcctctaatccagaagcaaactgtggttatttcaaatgggcttcatcc
aaattccgagacaagtga
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