Raphanus sativus (radish): 130494313
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Entry
130494313 CDS
T06014
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
130494313
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130494313
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
130494313
NCBI-ProteinID:
XP_056845003
UniProt:
A0A9W3C0K7
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Position
6:3447125..3450076
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AA seq
396 aa
AA seq
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MSSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFA
EVNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGEVPGNVLLVTFEGVESH
HVSIDVIHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLPE
HVGSCNLRMSYSAHTDLNIKFQSHRSRDYTDPYLPVNQTAMDGSMQPALGADGKRVETQS
NVLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEAL
EGHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQKVPGVAAASGPTDG
WHNGQVQTQYAGSSYMYSPADPTGASPSSGHPPYYG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcatcacagttcaggtacacgcagacgccgtcgaaggtggtgcacctgagg
aatctaccgtgggaatgcgtggaagaggagctcatcgacctatgcaaacgattcggaaag
atcgtcaacaccaagaccaatgtcggcgccaatcgcaaccaagccttcgtcgaattcgct
gaagtgaatcaggctatatcaatggtatcgtactatgcttcgtcttcagagcctgcacag
attcgagggaaaactgtttatatacagtactctaatcgtcatgagattgtcaacaatcag
agtcccggagaggtccctggaaatgtcctcttggttaccttcgaaggagtcgaatctcac
catgtcagcatcgatgtcatccatctggtgttttctgcttatggctttgtgcacaaaatt
gccacttttgagaaagctgctggtttccaggcactagttcagtttactgatgtggacact
gctttagcggcaaggactgcgctggatggcagaagtataccaaaatatctgcttccagaa
catgtaggttcttgcaatttgcgaatgtcttattcagctcatactgatctaaatatcaag
tttcagtcccaccgcagcagggactacacagatccataccttcctgtgaatcaaaccgct
atggatggttctatgcagcctgctttgggtgctgatggaaagagggtagaaactcagagc
aacgtcctgcttgcgttgattgagaacatgcagtacgctgtcaccgttgatgttcttcac
acggtgttttccgcgtatggaactgtgcagaagattgcaatatttgagaaaaatggttca
acgcaagccttaattcaatactctgacataccaacggcgacaatagcgaaagaagcactg
gaaggacactgcatatatgacggtggctactgtaagcttcgactaacatactctcgtcat
actgatctcaatgttaaggcatttagcgacaaaagcagagactacacacttcctgatcta
agccaactggtggggcaaaaagttccaggagtggctgcagctagtgggccaacagatggt
tggcacaatgggcaggtgcagactcaatacgcgggaagttcatatatgtactcaccagct
gatcccacaggagcttcaccttcttctggtcatcctccttactatggttga
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