Raphanus sativus (radish): 130494324
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Entry
130494324 CDS
T06014
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130494324
03012 Translation factors [BR:
rsz03012
]
130494324
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130494324
mRNA cycle factors
Stress granule specific factors
130494324
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-4
130494324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
130494324
NCBI-ProteinID:
XP_056865519
UniProt:
A0A9W3DP58
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All DBs
Position
4:51674175..51680343
Genome browser
AA seq
1624 aa
AA seq
DB search
MSYNQPRPDTQQYRRTGRSTGYHQQQQQQQPHRSSTAGYGRGAGGGPPPASSAAVDPSNR
SFKKPGNNAQGGHQQQQQQQQPRVNLPPVNSNHNGPNVQSRSQGEPVGGGPVANSTSGAA
IPKAPTSQSPAAMNSKSNESQNTAKGAVPGDPSKPFAFQFGSLGPDLMKIPARTSSAPPN
MDEQKRAQLQQASLKPAPNVPAPVPKKDSPNKAADVQVHHMSPLNQTQKSPITHIRMPSV
QTPYQHPQVPHPVHFGPPPNMHMQPPNVAPTSFQMPMPMGLPMGNTPQIHQQVFFQGPPS
HPMHHQGMMHQAPQGHGFATPMGAQIHPQMGHVGVGLTPQYPQQQGGKYGGGRKTTPVKI
THPDTHEELRLGGRGELHQDGQPQGPKSHPNTPPRSHPVSTFASRPLHVVQTSFNSSPIT
YTPRPLHVVQTDFNSGPVIDGSQRVQFTNHSTHTAPQPFKPASEAHVSSDSSSAKAHVTS
SALPAPGRVTVKQAPTPEKAELPKARPHEETNVALSQKKVEAGSLDSLQQPKPGSVSALS
NSTAPPAKAPVETVTVATTTIGSVKKVNESSSVEDQTRTCKVEPSHNATEVHGQTPVSDL
ETKATVAKENSSLPATNGFEKQNVLASASPDTRIDKTAEDLNCDEGTISGKEVDESVNSD
EKLETVSGVLEKAQNEVDGATDICSDSDKSSKVADDTSSELQHSTHTQSSTVPVEHSSNS
LTSTTATLSKDRTAFESNTKRPTSTKGKKKIKEILQKADAAGTTDLYNAYKGPEEKKEIA
MPLESSDVSNQKLQDVVEATVDTEPVKNEPENWEDAADVSTPKLESVQGKPGSADEVRDS
CSNMEKKYSRDFLLKFADMVTALPEGFDISSDVASSVIGPPHHEHGKVMDRQGSSSGRRP
SNMPDDRWAKNQGSLPSGQHGGNVGFRSGQGGNSGVLRNPRMQQGPIMSRPMQPVGPMVG
MGRNDMWQRGSNFQQKGLFPSPHTPMQVMHRAERKYQVGTVTDEEQAKQRQLKGILNKLT
PQNFEKLFEQVKGVNIDNVVTLRGVISQIFDKALMEPTFCEMYADFCVHLSGALPELNED
GEKVTFKRLLLNKCQEEFERGEKEEEEASRVAEEEQAEQTEEEREEKRLKVRRRMLGNIR
LIGELYKKRMLTEKIMHACIQKLVGYDQDPHEENIEALCKLMSTIGVMIDHSKAKVHIDT
YFDRMKMLSGKEEYSSRVRFMLINAIDLRKNKWQERMKVEGPKKIEEVHRDAAQERQTQA
KRLSRGPSMNVSGRRSHMEYSPRGGGGGMLSPPSAQMGGYHGPSQGRSYNNNQDIRFDER
PAYEPRIVPMSQRSVGEEPITLGPQGGLGQGMSFRKPAVGSNSDPRRPAGGLNGVGSQRP
ASPVTHGRSSPQERGSAYVHREFASLSRASEPSSEVPSARQVPQGPSAAVNIPQERLQDM
SLSAIKEYYSARDEKEIGLCIKDMNSPAFHPTMISLWVTDSFERKDKERDLLAKLLVNLV
KSADNDLTGAELVKGFETVLTTLEDAVNDAPKAAEFLGKIFGKSVTENVVTLAQIGRLIL
EGGEEPGSLMEFGLGGDVLGSVLETIKSEAGEEAFVEIQRSSGLRIEDFKPPAPNRSKIL
DKFT
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaatcaaccacggcccgatactcaacagtatcggcgaaccgggcgatccacc
ggctatcaccaacaacaacaacagcaacaaccgcaccgatcttccaccgccggttacggc
aggggagccggcggtggccctcctcccgcctcttccgccgccgtcgatccctctaatcgc
agttttaagaagcctggcaataatgctcaaggagggcatcagcagcagcagcagcagcag
cagcctagggtgaatctgcctcctgtgaatagtaatcacaatggtcctaatgtacaatct
cgctctcaaggagagccggttggtggtggaccggtcgcgaattcaacgagtggagctgct
attccaaaggctccaacttcgcagtctcctgctgctatgaattctaagagcaatgagtct
cagaacacagctaaaggagcagtccctggagacccttctaaaccatttgctttccagttc
gggtcacttggtcctgatttgatgaagattcctgctcgaactagctcagcacctcctaac
atggatgagcagaaacgtgcgcagctgcagcaagcgtctttaaaaccagcaccgaacgtt
ccagctcctgtacctaaaaaagactcaccaaataaggctgcagatgtgcaagtccatcat
atgtctcctctaaaccaaacgcaaaagtctccaattacgcatatccggatgccttctgtc
cagacaccttatcagcatccgcaggttcctcaccctgtgcactttggtcccccaccgaat
atgcacatgcagcctcccaatgtggctccgacctcttttcagatgccaatgcctatggga
ttacctatgggaaatacacctcagatccatcagcaagtgttttttcaaggtcccccttca
caccccatgcaccatcagggtatgatgcatcaggcgcctcaagggcatggttttgctact
ccaatgggtgctcagattcatcctcagatgggccacgtgggtgtgggtttgacccctcaa
tatccccagcagcaaggaggcaaatatggtggggggcgtaagacaacacccgtcaagatt
acacatccggacacgcatgaagagctgagacttggtggacggggtgagctgcatcaagac
ggccaaccacaaggtccaaaatcgcatcctaacacacctcccagatcacatccagtgtca
acatttgcttcacgaccacttcatgtggttcaaacctcttttaactccagtccaataaca
tatactccacgaccacttcatgtggttcaaaccgattttaactccggtccagttattgat
gggtctcagagggtacagtttaccaaccattctactcatactgctccacagcctttcaaa
cctgcatctgaggcacatgtttcatctgattcttcatctgcgaaagcacatgtgacgtca
tctgctctgcctgcacctgggagggtaacagtgaagcaagctcctactcctgaaaaggct
gaattacctaaagccaggccacatgaagaaactaacgttgctctgtcacaaaagaaggtg
gaggcaggttcattggactctttacagcagccgaaacctggctctgtctctgcgttatca
aattcgactgctccgccagcaaaggcacctgtggagacggttacagttgcaacaactacg
attggaagtgtgaaaaaggtgaatgagtcgagttcagtggaagatcaaacacggacgtgt
aaggtggaaccctctcataatgcaactgaggttcatggacagactccggtatctgatctc
gaaacaaaagccacggttgctaaggaaaattcatcacttccagctaccaatgggtttgag
aagcaaaacgttctagcttctgcctcaccagatacaagaattgacaaaactgctgaagac
ctaaactgtgatgagggaactatttcaggaaaggaggttgatgagtctgtaaattctgat
gagaagctcgaaacagtatcaggcgtgcttgagaaggcacagaatgaggtggatggtgcc
acagacatttgttccgactcggataaatcatctaaagttgcagatgatacaagctctgag
cttcaacattccactcatactcagtcatctacggttcctgttgaacattctagtaacagt
ttgacatctaccacagctactctttctaaggatagaactgcttttgaatcgaacacaaaa
agacctacttctaccaaaggaaagaagaaaataaaagaaattcttcagaaggcagatgct
gcagggacaactgatctctataatgcttataaagggcctgaggagaagaaagagattgca
atgcctttggagagctctgatgtttcaaaccagaagctgcaggatgttgttgaagccact
gtggatactgaaccagtgaaaaatgaaccggaaaactgggaagatgcagctgatgtttcc
acaccaaagctggaaagtgtgcagggaaagccaggttccgcagatgaggtcagagacagc
tgcagtaatatggaaaagaaatactcccgggatttcctccttaagtttgcagacatggtt
actgctcttcctgagggctttgacatttcgtctgatgttgctagctccgtaatcggtccg
cctcatcatgaacacggaaaggttatggatcggcaaggtagtagtagtggtcgacgtccc
agcaatatgcctgatgataggtgggcaaagaatcagggttctcttccctcaggacaacat
ggaggtaacgttggtttccgaagtggtcaaggaggaaactcaggagttctaagaaaccct
cgtatgcagcagggcccgattatgtctagaccaatgcaacctgtgggtccgatggtagga
atgggcagaaacgacatgtggcaacgaggttcaaatttccaacagaaaggactttttcct
tctccgcatactcctatgcaggtgatgcacagagctgagagaaaataccaagttggtact
gttacagatgaagaacaggcaaagcaaaggcagttgaagggtatcttgaacaagctgact
ccacagaactttgagaagctgtttgagcaagttaaaggtgtcaatattgacaacgttgtt
acgcttaggggtgtcatctcacagatatttgacaaagctttgatggagcctaccttctgt
gagatgtatgcagatttctgtgtacatctgtctggggcgttacctgaattaaatgaggac
ggtgagaaggttaccttcaaaagattgctactcaataagtgtcaggaggaatttgagaga
ggagagaaagaggaggaagaagcaagtagagttgctgaagaagaacaagcagaacaaact
gaggaggaaagagaagagaagagactcaaagttcgtaggagaatgctgggtaatattaga
ctcattggtgagctatacaaaaaaaggatgttgactgagaagatcatgcacgcatgcatc
caaaaattggtcgggtatgatcaggatccacatgaagagaacattgaagctctgtgtaaa
ctgatgagtacgataggagttatgatcgatcatagcaaagctaaggttcacatagataca
tattttgatagaatgaagatgctatcaggcaaagaagaatattcttctagggtgaggttc
atgttgattaatgccatagatctgagaaagaacaaatggcaggagcgaatgaaggttgaa
gggccaaagaaaatagaggaagtgcacagagatgctgcacaagaacgccaaactcaagct
aagaggctatcgcgtggaccctcaatgaatgtgtcaggaagaagaagtcatatggagtat
agtcctaggggaggaggaggaggaatgctgtcacctccgagtgcccaaatgggtggttat
catggaccatcccaaggtcgtagttataataataaccaggacattagatttgatgaaagg
ccagcctatgagcctaggatagttccaatgtctcaaaggtcagtaggtgaggagcctatt
accttgggtcctcaaggtggtcttggtcaaggaatgtcgtttagaaagcctgcagtaggg
tcaaattctgatcctaggcgaccagctggaggtttgaatggtgttggctcacaaagacct
gcaagtcctgttactcacggacggtcaagtcctcaagagcggggatcagcttatgttcac
agggagtttgcaagtctgtctcgtgcttctgaaccgtcatcagaagtgccatctgctagg
caagtaccgcaaggaccatcggcagcagtgaacatccctcaggaacggttacaagatatg
tccttatctgccattaaggaatattacagtgcccgagatgagaaggagattggtttatgc
ataaaagacatgaattcaccagctttccacccaacaatgatttctctgtgggttactgat
tcttttgagagaaaagacaaagaaagagatctcttagcaaagctccttgttaaccttgtg
aaatctgctgacaacgacttaaccggagccgaactagtgaaagggtttgaaaccgttttg
acgacactggaggatgctgtgaatgatgctccaaaagcagcagagtttctaggcaaaatc
ttcggtaaaagtgtgactgagaatgtagtgacattggcacagattggtcggttaatactt
gaaggaggagaagaaccaggaagtctgatggagtttgggttaggaggtgatgttcttggg
agtgttttggagacaataaagtcagaagcaggagaagaagcttttgttgagattcaaagg
agctcaggtctgaggattgaagatttcaaacctcctgcacctaacaggtctaagatatta
gataaatttacttag
DBGET
integrated database retrieval system
