Raphanus sativus (radish): 130494368
Help
Entry
130494368 CDS
T06014
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130494368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
130494368
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130494368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DUF6525
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
130494368
NCBI-ProteinID:
XP_056852193
UniProt:
A0A9W3CKP4
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MASPKEKDDAPMLPISDTSRTRPFTSRSRSVSLANTCSTIDGFDSSTVVLGYTGPLRAQR
RPPSGQMSGPLSSTRTPEPLFLLPPPSDSVGVSSSQPEGYPSFTTLQHKNSDEEFVLKHA
NLLRSGQLGMCNDPYCTTCPSYYNRKATQIPSSRVSAFFDSKFHNALYDDAKGWARRFAT
SANRRLPGIMNPHSKFVQSWTKFFALSCLLAIFIDPLFFFLILVKQNDKCIVIDWPMAKA
FVAVRSATDVLFSVNILLQFRLAYVAPESTVVGAGQLVAHPRKIARHYFRGKFLLDLFIV
MPLPQILILWIIPEHLGASGANYAKNLLRAAVLFQYIPKLYRLLPFLAGQTPTGFIFESA
WANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRDACGNSDHECRNLIDCGRGDSYEAF
AAWKGNASASACFHEDGFPYGIYKKVVNLTNHTSLFTRYSYSLFWGFQQISTLAGNQEPS
YFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGRRNLEMTLRRRDVEQWMSHRRLPEG
IRKRVREAERFNWAATRGVNEELLFENMPDDLQRDIRRHLFIFLKKVRIFSLMDESILDA
IRERLKQRTYISSSTVLHRGGLVEKMVFIVRGEMESIGEDGSILPLSEGDVCGEELLTWC
LERSAVNPDGTRIRMPSKGLLSNRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRNPRVQG
AIRYESPYWRLRAARQIQVAWRYRRRRLHRLYTAQSSYSL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccccaaggagaaagatgatgcccccatgcttccaatctcagacacgtctcgt
actaggcctttcacttccaggtctcgtagcgtttccctcgcaaacacttgttccaccatc
gacgggttcgacagctccactgtggttttaggctacacaggtcctctccgagcccagaga
cgacctccttcaggtcaaatgagtggtcctctttcctctactcgcactcctgagcctctc
tttcttctcccacctccttctgattcagttggtgtctcctcgtcacagccggaagggtat
ccttctttcactactctccaacataaaaactcagacgaggagttcgtgttgaaacacgca
aatctcttgaggtctggacagttaggtatgtgtaatgatccttactgtaccacttgtcct
tcttattacaaccgcaaagctacccaaatccccagttccagagtttctgccttctttgac
tccaagttccacaatgctctgtatgatgatgctaaaggctgggctaggcggtttgctaca
tctgctaatagacgcttaccaggaatcatgaatcctcactccaaattcgttcagagctgg
actaagttctttgccctctcatgcttgttggctattttcatagatcctctcttcttcttt
ctcatattagtcaaacagaatgacaaatgcattgtgattgattggccgatggccaaagca
tttgtagctgttagaagtgcaacagatgttttattctctgtaaacattctgcttcagttc
cggttggcctatgtagctcctgagtctacagttgttggtgctggccagttagttgctcat
ccaagaaaaatagctcggcattactttagaggaaagtttttactagacttattcattgta
atgccacttccacagatattgatattatggataataccagaacacttgggtgcttctggg
gcaaactatgcgaagaaccttttacgcgctgcagttcttttccagtacattccaaagttg
tatagactactaccatttcttgctggccaaacacctacaggcttcatatttgagtctgct
tgggctaattttgttattaatcttctcacctttatgcttgctggtcatgttgttggctct
tgctggtatctttttggtctgcagagagttaatcaatgcctacgagacgcttgcggtaac
tctgatcatgaatgtagaaatcttatagactgtggtcgtggagatagctatgaagcgttt
gctgcgtggaaaggtaacgcaagtgcaagtgcttgttttcatgaggatggttttccttat
ggaatctacaagaaggtagtcaatctcaccaatcatactagcctcttcacaagatatagt
tattctcttttctgggggtttcagcaaatcagcacgcttgctggaaaccaagagccaagt
tactttcttggggaggtcttctttaccatgggaattataggtctggggctattgcttttt
gcgcttcttattggtaatatgcagaacttccttcaagctcttggtcgaaggaatcttgaa
atgacgctgagacgacgtgatgtagagcaatggatgagccatagaaggttgccagaaggt
ataagaaagagggtgcgagaggcagagcggttcaactgggctgcaactagaggagttaat
gaagaattgctatttgagaatatgcctgatgaccttcaaagagatataagacgacacctc
ttcatatttctcaagaaggtgaggatattttcgttaatggatgaatcaatcttagatgcc
atccgtgagaggctgaaacagaggacatacataagtagtagcacagtcttgcaccgtgga
ggtctagttgagaaaatggtatttatagtgaggggtgagatggagagcattggtgaagac
ggttctattcttcctttatcagaaggagacgtttgtggtgaagagctcctcacttggtgc
cttgaacgatctgctgttaatcctgatgggacgaggataagaatgccatcaaagggattg
ctaagcaacagaaatgttaggtgtgtgacaaacgtggaggcattttccctgagtgtagca
gatcttgaagacgtaacaagcttgttctcgagattcttaaggaatcctagagtgcaagga
gccatcaggtatgaatctccatattggaggctacgagcagctaggcagattcaggtagct
tggagataccgaaggagacggcttcatagattgtacactgctcagtctagttacagcctt
tag
DBGET
integrated database retrieval system
