KEGG   Raphanus sativus (radish): 130494510
Entry
130494510         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC130494510
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rsz03009]
    130494510
   04121 Ubiquitin system [BR:rsz04121]
    130494510
Ribosome biogenesis [BR:rsz03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    130494510
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     130494510
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Sof1 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR19_1st eIF2A VID27 PROPPIN WDR54
Other DBs
NCBI-GeneID: 130494510
NCBI-ProteinID: XP_018477966
UniProt: A0A6J0N1Q9
LinkDB
Position
Unknown
AA seq 454 aa
MRIKTISRSVDEFTRERSQDLQRVFHNFDPSLRPMEKAVEYQRALTAAKLEKIFARPFVG
AMDGHRDGISCMAKNPNYLKGIFSASMDGDIRLWDIATRRTVCQFPGHQGAVRGLTVSTD
GNVLVSCGIDSTVRLWNVPRPSLEDSDLSSEKSAEPSAVYVCKNALLAVDHQFEGELFAT
AGAQIDIWNHNRSQPVHSFKPGNDSVISVRFNPGEPDILAVSSNDRRMIIYDIRMSSAAR
EIRMQTKTNSIAWNPMEPMNFTGANEDGNCYSFDGRKNEEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSSDATYVISGSDDTNLRLWK
AKASEQLGVILPREQKKHEYNEAVKNRYKHLPEIKRIVRHRHLPKPIYKAIAESRAVNNA
KKRKDDRRKASSAPGTIVTKPLRTRRIINEREVE
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgaggattaagacgatatcaagatcggttgatgaattcacccgtgaaagaagtcaggat
cttcagagggtctttcacaacttcgacccgagtcttcgacccatggagaaggcggttgag
tatcagagggcactcacagctgccaaacttgagaagatattcgcaaggccgttcgtagga
gcaatggatgggcatcgagatggaatctcgtgtatggctaagaaccctaattacttgaag
ggaatcttctccgcttctatggatggagatattcgtctttgggatatcgctaccaggcgt
acggtttgccaatttcctggtcatcaaggagctgtgcgtggtcttacagtatcaaccgat
ggcaatgttttggtttcatgcggaattgatagcactgttcgtttgtggaacgttcctcgt
ccttcgcttgaagactctgacctctcttctgaaaaatctgctgagccgtctgcggtctat
gtctgcaagaatgcgttattggctgttgatcatcagtttgaaggagaactttttgctact
gccggagctcaaattgatatatggaatcataataggtctcagccagtccacagtttcaag
cctggcaatgactctgtaatatctgtccggtttaatcctggagagcctgatatattggcg
gtatcttctaacgatcggagaatgatcatttatgatatccgcatgtcttctgcagcaagg
gaaattcgcatgcagaccaaaacaaactcaatcgcatggaaccctatggagcctatgaac
ttcacaggtgcaaatgaagatggcaattgctatagttttgatggtagaaagaatgaagaa
gccaagtgcgtgcataaagatcatgtttctgcagtgatggatattgatttttcaccaact
ggtcgtgaattcgtcacgggttcttatgatcgatccgtgagaatcttcccatacaatgga
ggacacagcagagaaatctaccatacaaagaggatgcagagagtattctgtgtcaagtat
agcagtgatgctacctatgttatatcggggagtgatgacactaatctcaggctatggaag
gccaaagcatcagagcaactaggagttattcttccaagggagcagaagaagcatgagtac
aatgaagcggtgaagaatcggtacaagcatcttcctgagatcaagcgtattgtcagacac
aggcacttgccgaaacctatatacaaagcaatagcggaaagcagagccgtgaacaatgca
aagaagaggaaagatgaccgaaggaaagctagcagtgctccaggaacaattgtcactaaa
cctctgcggacaagaaggattatcaatgaaagagaagttgagtga

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