Raphanus sativus (radish): 130494550
Help
Entry
130494550 CDS
T06014
Name
(RefSeq) glutamate receptor 3.5-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
130494550
Ion channels [BR:
rsz04040
]
Ligand-gated channels
Glutamate (ionotropic)
130494550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
130494550
NCBI-ProteinID:
XP_056860821
UniProt:
A0A9W3DAD6
LinkDB
All DBs
Position
3:19248321..19251891
Genome browser
AA seq
946 aa
AA seq
DB search
MGFFVMISGVSMGLMLLCVSGFWVLPTEGAGRGSFLRNSSSSRPSSVNVGALFTYDSFIG
RAAKPAFMAAIEDVNADQNILRATNLNIVFHDSNCSGFVGTMGALQVMENKVVAAIGPQS
SGIGHLISHVANELHVPLLSFAATDPTLSSLQYPYFLRTTQNDYFQMNAVADFVSYCRWR
EVVAIFVDDEYGRNGISVLGDALAKKRAKISYKAAFRPGADNSSISDLLVSVNLMESRVF
VVHVNPDSGLNVFSVAKSLGMMESGYVWIATDWLLTALDSVEPLDPKTMDLLQGVVAFRH
YTPESNEKRRFKARWKHLRSKESSGGDDGSFNSYAMYAYDTVWLVARALDVFFTRGNTVT
FSSDPNLNKTNGTKIKFSALSVFNEGERFLQVIHEMNYTGLTGQIQFDPEKNRINPAYDV
VNINSRGPHRVGYWSNHTGFSVESPETFYSKPPNTSAEHQRLNEIIWPGGVTKKTPRGWV
FPDNGEPLKIGVPNRVSYQNYASKDDNQRGVKGYCIDIFEAAVQLLPYPVPRTYILYGDG
KRNPSYDNLVNEVAANNFDVAVGDITIVTNRTKFVDFTQPFMESGLVVVAPVKGAKSSPW
SFLKPFTVEMWAVTGLLFLFVGAIIWILEHRFNEEFRGPPRRQIITVFWFSFSTMFFSQR
ENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLTSRIEGMDSLIISNEPIGVQD
GTFAYKYLVNELNIAPSRIIPLKNEEEYLSALQLGPRGGGVAAIVDELPYIKALLSNSNC
QFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLSEEGKLEKIRKKWLTYSHECSVQIA
DTENYQLSVQSFWGLFLICGIVWFIALTLFCWKVFWQCQRLRPEEESDEVRASEVASSSR
SGRSLRAGSFKDLIKVVDQREVEIKEMLKHKSSKKLKASQSSAETP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggttttttcgtgatgattagtggtgtttctatgggacttatgctcctatgtgtttct
ggcttctgggttttgccgacagaaggtgcaggtagaggaagtttcttaagaaactcttcc
tcttcccggcctagctctgtcaatgtcggagctctgtttacttatgattctttcatagga
agagcagctaaacccgcgtttatggcggccattgaagacgttaatgctgaccagaatatt
ctcagggcaaccaatctcaatattgtcttccatgactcgaactgtagtggatttgttggc
actatgggagctttgcaggtaatggagaacaaggtggttgcagccattggtccacaatct
tcaggaattggtcacttaatctcccatgtagccaatgagcttcatgtacctctcttgtca
tttgcagcaactgacccgacgctttcttcactacagtacccttatttccttcgaaccaca
cagaacgactacttccagatgaacgcggtcgctgattttgtatcctattgccgatggaga
gaagtcgttgcgatctttgttgatgatgagtatggcaggaacgggatatctgtattaggc
gatgctttagccaagaaacgtgccaagatctcttacaaggctgcgtttagacctggtgca
gataacagctcgatcagtgacttactggtttctgttaatctgatggaatctcgcgtcttt
gttgttcatgtgaatcctgattcaggtttaaacgttttctctgtcgccaagtctcttgga
atgatggagagtggttacgtctggatcgccactgattggcttcttacagctttggattca
gtggaaccgctagatcccaaaactatggatcttttgcaaggagtggttgcttttcgccat
tacacacctgagagtaacgagaagagacggtttaaagcaaggtggaaacaccttagatcc
aaggagagttcaggaggtgatgatggtagcttcaactcttatgcaatgtatgcttatgat
actgtttggttggtagctcgcgctctcgatgttttctttacccgaggcaatacagtgact
ttctccagtgatccgaatctgaataaaaccaacggtaccaaaatcaagttctcagcgctt
agcgtcttcaacgaaggggagaggttcctccaggtcattcatgagatgaattacacaggt
ctgaccggacaaatccagtttgatccagagaaaaaccggatcaatccagcatacgacgtt
gtaaacattaacagtagaggtccacacagagttggctactggtcgaatcatacaggcttc
tcagtcgagtctcctgagacgttttactctaaacctccgaacacatctgcagagcatcaa
cgtcttaatgagatcatatggccaggaggagtaacgaagaagacgccacgaggttgggtg
ttccctgacaatggagagccgctcaaaatcggggtgcctaaccgcgtgagctaccaaaac
tatgcgtctaaggacgataaccagcgtggtgttaaaggatattgcatagacatctttgaa
gctgcggtgcaactgcttccgtaccccgtcccacgtacttatatactatatggagacggg
aagagaaacccttcgtatgacaatctcgtaaatgaagttgctgcaaataattttgatgta
gcggttggggatattactattgttacaaacagaaccaagtttgtagattttacgcagcca
tttatggaatcagggcttgtggtggtagctccagtgaagggagccaagtctagtccatgg
tccttcttgaagccattcactgtagagatgtgggctgttactggactcttgtttctcttt
gtgggagccatcatttggattcttgaacatcgctttaatgaagagtttcgtggacctcct
aggcgtcaaatcatcacagttttctggtttagcttctcaacaatgttcttctctcagagg
gagaacacggtgagcactttagggaggtttgtgctactcatatggttgtttgtagttctg
atcatcaactcaagctacacagccagtctcacttcgatcctcaccgttcaacagctaaca
tctcggatagaaggaatggacagtctaataataagcaacgaaccaattggagtccaggac
ggtacctttgcatacaagtatctggtcaatgaacttaacatagctccatcaagaatcatt
ccgcttaaaaacgaagaagaatacctctctgctcttcaacttggtcccagaggtggtggt
gtagcagctatagtcgacgagcttccttacatcaaagctttattgtcaaacagcaactgc
cagttccgtactgttggacaggagttcacccggacaggctggggatttgctttccagaga
gattctcctttagctgtggacatgtcaacggcgatcctgcagctgtctgaagaaggaaaa
cttgagaaaatccgcaagaaatggcttacgtacagccacgaatgctcagtgcagattgca
gacacagagaactatcaactctcggtacagagtttctggggactgttcttaatatgtggt
atcgtttggtttattgcgctcaccctcttctgctggaaagttttctggcaatgccaacgg
ttaagaccagaggaagagagtgatgaagtcagggcgagcgaagtagctagttcgtctaga
tcagggagaagtttgagggcaggaagtttcaaggacttgatcaaggttgtggatcagaga
gaagtagagatcaaggagatgcttaagcataagagcagtaagaaactcaaagctagccaa
agctcagctgaaactccatag
DBGET
integrated database retrieval system
