Raphanus sativus (radish): 130494686
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Entry
130494686 CDS
T06014
Name
(RefSeq) serine/threonine-protein kinase ATG1c-like isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130494686
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rsz01001
]
130494686
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130494686
03029 Mitochondrial biogenesis [BR:
rsz03029
]
130494686
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130494686
Protein kinases [BR:
rsz01001
]
Serine/threonine kinases: Other
ULK family [OT]
130494686
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
130494686
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130494686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
ATG1-like_MIT2
Kdo
Pkinase_fungal
YrbL-PhoP_reg
Motif
Other DBs
NCBI-GeneID:
130494686
NCBI-ProteinID:
XP_056860657
UniProt:
A0A6J0MX42
LinkDB
All DBs
Position
3:complement(16505559..16509515)
Genome browser
AA seq
722 aa
AA seq
DB search
MAQSTARSGPRVVGDYLVGRQIGSGSFSVVSEARHRVHGTHVAIKEIAMSRLNKKLQESL
MSEIFILRRIDHPNIIRLLDMIESPGRIHLVLEYCKGGDLSVYIQSHGSVPEATAKHFML
QLAAGLQVLRDNNIIHRDLKPQNLLLSTDGNDADLKIADFGFARSLQPRGLAETLCGSPL
YMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNSQIQLLQNILRSTGLQFPADCR
DLSLDCIDLCQKLLRRDPVERLTFEEFFNHPFLSDRQSSYDFSSSRLGSRRMDGFLSSGS
SPSRNMEESSQEDCLPFLIDDDFSGPEGSPSHLRRTSSMRSSSGFNTDARVERKEMESSP
LNCTEPTSRVSRINQGVENNRFRNETHIDSDRRNHGEPPKGRVDDSQDSMDQDFVLVSGP
PVDLPSSSSSSSKAYNFPFKSQSPPVELFNRSISSTAPMPIIGATGNNVGRFGSLDSQST
SHGSLDLGDAFEQPSTNSLTRITSLKKCAATIAELVHERIKSDKYLEAFSIQLAILAIWK
QALHICHTQAISGLEGSPGQDINKLRGSRSSSLKNEHITDLSHDGSEEISSQIQRQFIRE
IELAEELSKNIEPGNAMMPDAMETIFEAALDLGKLGGVKEVMGEIEKAGNQYSKAMRLLV
FLLVEAPMLILNPPLSLTNSDRYRLRTYIDILSRRLKHLQSHRRSSGSQMQGSSSAMMNK
QP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtccacggcgaggagcgggccgcgcgttgttggcgactacttggtgggtcgg
caaatcgggtcgggttcgttctctgtagtctcggaagcgaggcaccgcgttcacgggaca
cacgtcgccatcaaggagatcgcaatgagcaggcttaacaagaagctgcaggagagtctc
atgtctgagattttcatcctcaggaggatcgatcatcccaacatcatccgtttgcttgat
atgatcgagtctcctgggaggatacatttggtgttggagtattgcaaaggaggtgacttg
tctgtgtatatacagagtcatgggagtgttcctgaagctactgctaagcatttcatgttg
cagttagctgctggattacaagttcttcgtgacaataacattatccaccgcgatttaaag
cctcagaatcttcttctatccacagatggaaacgatgcagatctgaagattgctgatttt
ggatttgcaagatcgctgcagcctagaggccttgcagaaacattatgcggttcaccattg
tacatggcaccagaaattatgcaacttcagaagtatgatgcgaaggcagatctctggagt
gttggtgctatcttatttcaacttgtgacaggcagaaccccttttacaggaaacagccaa
attcagttgctccaaaacattttgagatcaactggattacaatttccagcggactgtaga
gatttaagtttggactgtatagatctgtgtcagaagttactgcgccgtgatccagtggaa
cgtttgacatttgaagagttcttcaatcatccgtttctttcggacaggcagtcttcatat
gatttctcaagtagtagattgggttcaaggagaatggacggtttcctttcttctggaagt
agtccttcgagaaacatggaagaaagttctcaagaagactgtcttccattccttatagat
gatgatttcagtggacctgaggggagcccttcacatttgagaaggacctcctcgatgagg
tcgtcctctggatttaacactgatgctagagttgagagaaaggagatggaatctagtcct
ttgaactgtacagaacctacttccagagttagtagaatcaaccagggagtggaaaacaat
agatttagaaatgaaacacacatagattctgataggagaaaccatggtgaacctcctaaa
ggaagagtagatgattctcaagactcgatggatcaagacttcgttctcgtatctggacca
ccagtggatctgccatcatcttcatcgagttcttcaaaggcttataatttcccattcaag
tctcagtctcctcctgtagagttatttaacagaagcataagttcaacggctcctatgcca
ataattggtgctactggcaacaacgttggccggtttggaagcctggacagtcagagcact
tctcatggatctctggatcttggagatgcttttgaacagccatcaactaacagcttgaca
agaatcacttctcttaaaaaatgtgcagcaacaattgcagaactagttcatgaaaggatc
aaatctgacaaatacctagaagctttctcgatccagctggcgattctggcaatttggaaa
caggcactgcacatatgccatactcaggcaatctctggtttggaaggaagcccaggccaa
gacattaacaaactaagaggaagtagaagcagcagcctaaaaaacgagcatatcactgat
ctcagccatgatggatcggaggaaatatcctctcagattcagaggcagtttatccgggag
attgagcttgctgaagaactttccaagaatatcgaacctggaaatgcaatgatgcctgat
gcaatggagactatctttgaagcagccctcgatcttggcaaacttggtggagttaaggag
gttatgggagagatagagaaggctggaaaccaatattcaaaagcgatgcgtttgctggta
ttccttctagtggaagcaccaatgctgattctgaatccaccattgtcgctcacaaactca
gacaggtaccgtctcagaacatatattgatatcctcagcagaagattgaagcatctgcag
tcgcatagaagaagctcaggctctcagatgcagggatcatcatctgccatgatgaacaag
caaccatag
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