Raphanus sativus (radish): 130494964
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Entry
130494964 CDS
T06014
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130494964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130494964
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130494964
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130494964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
130494964
NCBI-ProteinID:
XP_056841818
UniProt:
A0A9W3BRL3
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Position
5:29351576..29352183
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AA seq
151 aa
AA seq
DB search
MKRTDDKIRSAIINFDDFDCPICTEPFIAPIFQCDNGHLVCSVCCPKLRNKCPSCAFPID
DKRCRAMEKVLETIRIPCSVLGCTKVLCYGELSAHEKECTLSLCACPVPGCKYTASYKNI
YDHYITGHLKGSCWGRPMLDMFTSGMSFSVE
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacagatgataaaatacgctctgccattatcaattttgacgatttcgattgt
cctatttgtactgagccattcattgctccaatattccagtgtgataatggccatctggtt
tgctctgtttgctgtcctaaactgaggaacaaatgtccttcttgtgcttttcctatcgat
gataaaagatgtagagctatggaaaaagttcttgaaacgattcgtatcccatgctctgtg
ctaggttgcaccaaagttctatgttatggagaattatcagcccatgaaaaagaatgcaca
ttatctctttgtgcatgccctgtaccaggctgcaagtatactgcctcatacaagaatatc
tacgatcactatatcactggccacctgaaaggttcctgctggggaagacctatgcttgat
atgtttacatccggcatgtctttttctgtcgagtaa
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