Raphanus sativus (radish): 130495120
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Entry
130495120 CDS
T06014
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130495120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130495120
03029 Mitochondrial biogenesis [BR:
rsz03029
]
130495120
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130495120
Atg1 complex
130495120
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130495120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
DUF6964
Motif
Other DBs
NCBI-GeneID:
130495120
NCBI-ProteinID:
XP_056842229
UniProt:
A0A9W3BSD5
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Position
5:complement(34104015..34106424)
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AA seq
575 aa
AA seq
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MDFPENLPDMGRLEQIVSHFFPKALHIVLDSRIPSLQSRVGGRSRDRPNLKKSDKWFNLV
MGDRPAALEKLHSWHRNVLDSMIIDIILIHPNHDDETVIERWVVQYENPLIMSPQSSDPR
YQKVYKKAIILLRSLHAQTRLLPAYRASRQLSSSLASSSSSSGYEMVYKVSSFSDVFSPP
VTETMKEFRFTPVEVPPGRLCVSVTYRSDLSDFNLGAHITLPPRIITDYVGSPATDPMRF
FPSPGQSFEGASFQGRRRPPLTTERPHSWSSGFQRPPTPNQSFSPQFSPDFFHSSRTDGG
YGYGGDSHHHQLSPPFSPSGSPSTPRRISVRPGTAPVTIPSSATFNRYVSSSSNFSEPSR
NPLPPFSPKSTRRSPSSQDSLPGIALYKSSRSGESPSGGLMNHYPGHKLTKDSKYDSGRF
SGLLSSSGSPRFGFSRSPSRLSSQDDLDDPDCSCPFDFDDVDESGLHYSQSLDRRKTSSS
ISQSLPIGRKSQDAAVGVLVQMLKTAPPLRQDSSTYMASMSGVQREGGSSVSGTESEFSM
ARSTSDALEELRNYKQLKDLLLSKSKSFGGETRVH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggattttccagagaatctaccagacatgggaagattagagcagatcgtatcccacttc
ttccccaaggcactccacatcgtcctcgactcccgaatcccttccttacaatcccgcgtc
ggcggccgttcccgcgaccgccctaacctcaaaaagagcgataaatggttcaatctcgtg
atgggagaccgtcccgccgccctggagaagctgcattcttggcataggaacgtattagac
tcaatgatcatcgacatcatcctcatccatcccaaccacgacgacgagactgtgatcgag
cggtgggttgttcaatacgagaacccgctaatcatgtctcctcagagctcagatcctcgt
taccagaaggtttacaagaaagccatcatcctcctccgctctctccacgcgcagacgcgc
cttctccccgcctaccgcgcgtccaggcagctcagctcctctctcgcctcctcctcttcc
tcttcaggttacgagatggtctacaaggtttcgtctttcagcgacgtcttctctcctccc
gtcactgagaccatgaaagagttccgctttacccccgtcgaagtccctccggggcgtctc
tgcgtttctgttacttaccgttcagacttgtctgacttcaacctcggcgctcacatcact
ctgcctccgaggattataactgattacgttgggagtccagcgacggatcctatgaggttc
ttcccttctccagggcaaagctttgaaggtgcttcgtttcaaggtagaaggcggcctccg
ttgactactgaacgtccgcatagctggagtagcggctttcaaagacctcctacgccgaac
cagtctttctcccctcagttttcacctgattttttccactcctcacgtactgatggtggt
tatggttatggtggtgacagtcaccaccaccagctttcgcctcctttttcgccgtcgggt
tctccttctactccgaggaggattagtgtgaggcctgggactgctccagtgaccattcct
tcttcggctacgttcaatagatacgtttcgtcatcgtctaacttctctgagccgagtagg
aatcctctccctcctttttctcctaagagcaccagacgctccccttcctcgcaggactct
ttgcctgggattgctttgtacaagagttccagaagcggagagtctccttctggtggatta
atgaaccactaccctggccacaagcttaccaaggacagcaaatacgattcaggcaggttc
tctggactgctgtcttctagtggctcaccaagattcgggttttctaggagccccagtaga
ttatcttctcaagacgatttggatgaccctgattgctcatgcccttttgatttcgatgat
gttgacgagtctggacttcactacagccaaagtcttgaccggaggaaaacttcaagctct
atatcacagtcgctacctatagggaggaagtcacaggatgcagcggttggagtccttgtt
cagatgctaaagacagcaccgccattacgacaagactcgagcacttacatggcgtcaatg
tctggggttcagagagaaggtggtagttcagtgtcaggcacagaatctgaattttccatg
gctcgaagtacatcagatgcgctagaggaactgagaaattacaagcagctcaaagacttg
cttctctccaaatccaagagttttggtggagagactcgtgttcactga
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