Raphanus sativus (radish): 130495272
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Entry
130495272 CDS
T06014
Name
(RefSeq) probable inactive E3 ubiquitin-protein ligase SINAT6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130495272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130495272
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130495272
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130495272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
zf-Di19
Zn_ribbon_PaaD
zf-H2C2_2
DUF7501
DHH
Motif
Other DBs
NCBI-GeneID:
130495272
NCBI-ProteinID:
XP_056842766
UniProt:
A0A9W3BU93
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All DBs
Position
5:complement(37114236..37115549)
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AA seq
203 aa
AA seq
DB search
MEPPINDLQIECQVNELLDFPCSIDHHTREVITDKEKPYNCPYCGSKCTVTGDIQCLLEH
LRNDHHVEMHDGRCFSHRYVHHNPKHYHHATRMLTLLDCYGRQFCLHFEAFHLKKTPMYI
AFMQFMGDEEEATSFSYTLEVNGNGRKMTWQGVPRSIRDSHKTVRDSQDGLIITRKLALF
FSADNTNSKQLKLKISGRVWREH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggaacctccaatcaatgaccttcagattgaatgtcaggtcaatgagttgctcgatttc
ccgtgttccattgaccaccatacaagagaggtcatcactgataaggaaaaaccgtataat
tgtccctactgtggatccaagtgtacagtcacaggagatattcaatgtctgcttgagcat
ctaaggaatgatcatcatgttgaaatgcatgatgggcggtgtttcagtcatcgatatgtc
catcataatcctaaacattatcatcatgctactcggatgttaactcttctggattgttac
ggtcgacaattctgcttacactttgaagcattccaccttaagaagacgcccatgtacata
gctttcatgcaattcatgggagacgaagaggaagcgactagcttcagctacactttggaa
gtcaatggcaatggtagaaagatgacatggcaaggcgtgcctagaagcattcgtgacagt
cacaagacggtccgtgacagccaagacggcttgatcatcactcgcaagttagctttattc
ttctctgctgacaatacaaacagcaagcaactgaagttgaagatttcaggtcgtgtatgg
agagaacattga
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