Raphanus sativus (radish): 130496101
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Entry
130496101 CDS
T06014
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
130496101
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130496101
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Helicases
130496101
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
130496101
NCBI-ProteinID:
XP_056843865
UniProt:
A0A9W3BX11
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Position
6:1110112..1113028
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AA seq
542 aa
AA seq
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MEKSVNFLFGGTNFNRKKFAPDFAKFKNRKEEDDDAHNKKLSFFEEEEEEPEQEKAVSSS
SKKRKRKSANSEPVEGFDVFKSSKKSRSNKGKEVEQETKDETLENPKKELYRQIERDALS
RKQYNIHVSGNNIPAPLKSFTELSSRYGCKKYILRNLAGLGFREPTPIQRQAIPVLLSGR
ECFACAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTAREGKKLIKGSKF
NIRLMTKPLAKTADFSKLQCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSM
LKQIDGVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASKTVKQKLV
FAGTEEGKLLALRQSFAQSLNPPVLIFVQSKERAKELYDELKCDNIRVGVIHSDLPAGER
ENAVDSFRAGETWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGE
AITFYTEEDMPFLRNIANTMTSSGCEVPSWIMTLKKKKWKKHRPKRDAISTRPKESKIEQ
EE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagcgtgaattttctgttcggtggaacgaacttcaacaggaagaagtttgct
ccagatttcgccaagtttaagaatcgcaaggaggaggatgatgatgctcacaacaagaaa
ctgagcttctttgaggaggaagaagaggagcctgagcaagagaaggcagtttcctcctcc
tctaagaagagaaaacgaaaatctgctaattccgagccagttgaaggattcgatgtgttc
aagagctcaaagaagtcacgttccaacaaagggaaagaagttgaacaagagacaaaggac
gagactttagaaaatcccaagaaggagctttaccggcaaatagagcgagatgctttgtcg
aggaaacagtacaacattcatgtttctggtaacaacattccagccccacttaaaagcttc
acagagttgtcatccaggtatggttgtaagaaatacatattacgcaatttggctggactt
ggatttagagagcctactccaatccagaggcaggctattccagttctcctatcgggtcgt
gaatgttttgcctgtgctccaactgggtcaggaaagacctttgcttttatttgccccatg
cttataaaactcaagcgccattcaactgatggtataagagcagtcatcctctctcctgca
cgagagctagctgctcaaacagctagagaagggaaaaaacttatcaaaggaagcaagttc
aacatcagattaatgactaaacccctcgccaaaactgctgatttctcgaagctgcagtgt
gatgttctcatatcaacacccatgcggcttaaacgagccatcaaggctaaaaaaatcgac
ttaagcaaggtggagtatcttgtccttgatgaatccgacaagctgtttgagcagagcatg
ttgaagcaaatagacggcgtggtcaaggcttgttcaaacccttcgatcatacggtcactg
ttcagtgctactctacccgattctgttgaggagcttgcgcgttccataatgcacgatgct
gttcgtgtgatcattggccgaaagaacacagcatctaaaaccgtcaagcagaagcttgtt
ttcgctggaactgaagaagggaagcttctcgctcttcgccaaagctttgcacagagtctg
aatccaccggtactgatctttgtgcaaagcaaagaacgagcaaaggaactctacgatgaa
ctgaagtgtgataacatcagagtcggtgtcatccattccgatctccctgcaggagagcga
gagaacgctgttgatagcttcagagcaggggagacgtgggttctgattgccactgatgtg
atcgctagaggtatggatttcaaagggatcaactgcgtgataaactacgacttcccggac
tctgcttctgcatacatccataggattggtcgatcagggagagcgggaaggagcggtgaa
gcgataacgttctacacggaagaagatatgcctttccttaggaacatagccaacaccatg
acatcgtcgggatgtgaggttccgtcgtggatcatgactttgaagaagaagaagtggaag
aagcataggccaaaacgtgatgctatatccactcgacccaaagagagtaaaatcgaacaa
gaagagtaa
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