Raphanus sativus (radish): 130496234
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Entry
130496234 CDS
T06014
Name
(RefSeq) eukaryotic initiation factor 4A-1-like
KO
K03257
translation initiation factor 4A
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130496234
03012 Translation factors [BR:
rsz03012
]
130496234
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
130496234
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130496234
mRNA cycle factors
Stress granule specific factors
130496234
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-4
130496234
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130496234
Exosomal proteins of bladder cancer cells
130496234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Flavi_DEAD
DUF8050
Motif
Other DBs
NCBI-GeneID:
130496234
NCBI-ProteinID:
XP_056844123
UniProt:
A0A9W3BY05
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Position
6:complement(5634289..5636852)
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AA seq
412 aa
AA seq
DB search
MAGSAPEGTQFDARQFDQKLNDVLEGQDEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSIVQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD
NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
LVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRG
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatccgcaccagaaggcacacagtttgatgctcgtcagttcgaccagaagctc
aacgacgttcttgagggacaagatgagttcttcacctcttacgatgaggttcacgacagc
ttcgacgccatgggtctccaagagaatctcctcaggggtatctacgcttatggtttcgag
aaaccatctgcaatccagcagagaggaatcgtccctttctgcaaaggcctcgacgtgatc
caacaagcccaatccggtacgggcaaaaccgccactttctgctccggcgtcctccagcag
ctcgacttcagcatcgtccagtgccaggccctcgtcctggccccgaccagagagctcgcc
cagcagatcgagaaggtcatgagggccctcggcgactacctcggcgtcaaggtccacgcc
tgcgtcggtggaaccagcgtccgcgaggaccagcgcattctccaggccggtgtccacgtc
gtcgtcggaactccgggtcgcgtgttcgacatgctcaagaggcagtctctccgcgccgac
aacatcaagatgtttgttcttgatgaagctgatgagatgctctcccgtggtttcaaagac
cagatctatgacatcttccagcttctcccacccaagatccaagtgggtgtcttctcagca
acaatgccaccagaagctctcgagatcacgaggaagttcatgagcaagccagtgagaatc
ctggtgaagcgtgacgagctcaccctagaaggtatcaagcagttctacgtcaacgttgag
aaggaagactggaagctcgagacgctctgcgacctctacgagactctcgccatcactcag
agcgtcatcttcgtgaacacgaggaggaaggtggactggctcaccgacaagatgagggga
cgtgaccacactgtctcggccactcacggagacatggaccagaacacgagagacatcatc
atgagggagttcaggtccggctcctcccgtgtgctcatcaccactgacctcttggcccgt
ggtatcgatgttcagcaagtgtccttggttatcaactatgatttgccgactcagcctgag
aactaccttcaccgtattggaaggagtgggagattcgggaggaaaggtgtggcgatcaac
tttgtgaccaaggatgatgagaggatgctgtttgatatccagaagttttacaacgttgtt
gttgaggagcttccttccaacgttgctgatctgctttga
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