Raphanus sativus (radish): 130496594
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Entry
130496594 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130496594
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
130496594
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
130496594
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
130496594
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
130496594
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130496594
Prokaryotic type
130496594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
tRNA_synthFbeta
PheRS_DBD1
tRNA-synt_2
tRNA-synt_2b
DabA
PheRS_DBD2
Motif
Other DBs
NCBI-GeneID:
130496594
NCBI-ProteinID:
XP_056844772
UniProt:
A0A9W3BZU9
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All DBs
Position
6:43896005..43899468
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AA seq
486 aa
AA seq
DB search
MAEAAILGFLQNNESIPDSGNFAAEHNLDHEEVKNVIKSLQSFRYIEAKELKRETLVLTD
EGKKYAAEGSPEFHFFSAVPEEGTISKDDLEKKLDASVFKIGSTQAAKKKWVAMGKQVSR
KVQHVEDKVKESLLQLQQGLELDKESLNSLKXRKLIASQGWTGYSDIMKGPSYAPXRKTF
ATDLTRENLQNWKELEFKEYNFNAMGQPLDAGHLHPLLKVRKQFKDIFCQMGFEEMPTNN
FVESSFWNFDALFQPQQHPARDSHDTFFLKAPSTTRELPEDYVERVKQVHESGGYGSRGY
NYEWKREEANKNLLRTHTTAVSSRMLYALAKGPFTPKKYFSIDRVFRNEAVDKTHLAEFH
QIEGLICDRGLTLGDLIGVLEAFFARLGMPKLRFKPAYNPYTEPSMEIFSYHPGLEKWVE
IGNSGMFRPEMLQPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLKLIERNP
ICRVGI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcgatcctagggttcctgcagaacaacgaatcaatcccagattccggt
aatttcgccgcggagcacaacctcgaccacgaagaagtcaaaaacgtaatcaagagctta
caaagttttcgctacatcgaagctaaggagcttaaacgggaaacactggtgttgactgat
gaagggaagaagtacgcggcggaaggatcgccggagtttcactttttctcggctgttccc
gaggaaggtaccatatccaaggatgatctggagaaaaagctagatgcttctgtgttcaaa
attggaagtacacaagctgctaaaaagaagtgggttgcaatgggaaagcaagtctctagg
aaggttcaacatgtcgaagataaagtaaaggagtctcttttacagttacaacaaggactg
gaacttgacaaagaaagtctcaactctctcaaanccaggaaactcattgcatcacaggga
tggacgggatattctgacattatgaaaggtcccagttatgctcccnaaaggaagactttc
gctactgacttgactcgagaaaatctacagaactggaaagagttggaattcaaggagtat
aacttcaatgctatgggacaacctcttgatgcaggccatctccatccccttcttaaggtg
cggaagcagttcaaagacatattttgtcagatgggatttgaagagatgccaacaaacaac
tttgtggaaagcagcttctggaatttcgatgcactgttccagcctcagcagcaccctgct
cgtgactctcatgacaccttctttttaaaagctccttccacaacgagggaattaccagaa
gactatgtcgaaagggtgaaacaagtccatgagtctggtggatatggatctcgagggtat
aactatgagtggaaaagagaggaagcaaacaagaatcttctccgtacacacacaacagca
gtctcgtctaggatgctttatgcactcgcaaagggacctttcactcccaagaagtacttt
tcaatagaccgcgtcttcagaaacgaggctgttgacaaaacacatctggcggaattccat
cagattgaaggtttgatctgtgaccgtggtctgacattgggtgatctcattggtgtatta
gaagcgttcttcgctcgattagggatgcccaagctgcgtttcaagccggcatacaaccca
tacactgaaccaagcatggagattttcagctatcatccaggactagagaaatgggtagag
attggaaactctggcatgttcagacccgaaatgctgcagccaatgggtctgccagaggat
gtccgagtcattgcatggggtctttctcttgaaagaccaacaatgatcttatatggcgtt
gacaacatccgtgatctgttcggacacaaggtggatctcaaactcatcgaacggaatccc
atctgtcgcgttggaatctag
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