Raphanus sativus (radish): 130496759
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Entry
130496759 CDS
T06014
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9-like isoform X1
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
130496759
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
130496759
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
130496759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
MBD
WHIM1
FYRN
WSD
FYRC
Phage_zn_bind_3
DUF7028
Bromodomain
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
130496759
NCBI-ProteinID:
XP_056845164
UniProt:
A0A9W3C0Y6
LinkDB
All DBs
Position
6:3622012..3630968
Genome browser
AA seq
2131 aa
AA seq
DB search
MELTDSTKPQLGESRSAALDEDNRSFLGIDLNEIPSAGVVTPGGAVQDDDGEYEPVEVVR
SIHDNPDPAPGAPAEVPEPDRDAACGACGRPESMELVVVCDACERGFHLCCVSDGAEAAP
SADWMCSDCVTGGERSKLWPLGVKSKLILDMNASPPSDAEGYGGEDTSDSRKQHMLASTS
CMGNTFEHSSFLIPGRAHTLGFGFPSDLGNRFPSLDPSELLLQNLRHFISERHGVVLEDG
WRVEFKQPLNGYHLCAVYCAPSGKTFSSIQDVASYLGLATNGNYRCMDAEITNQTSLPPE
RLNMPKRRKTSRWPNNNFPEQKGSSVSAQLSRFPYSGHTMPPSDTLFQAVESLSSGNNGC
GCEEANKGLPMQFEDFFVLSLGRIDIRQSYHNVNMIYPIGYKSCWHDKITGSLFTCEVSG
GCSGPVFKITRSPCSTSFLPVGSTVFSCPKIDKMVEQNIDKRGDRRDSIQDNDDTVEILL
SDPSPPLGDDILSCLREKNISNTFNCLRSEVGPSLLDLNNTLSYNQQHGIEIGEIVVEED
SLSVAWKKVSQKLVDACFNVLKHKGSMNFRCKHVDRETREINWDTVNEKDDVILSLSRFC
CSLAPNSATRGEKDSSEIASLVDVLSRWLDQSRFGIDADFVQEMIERMPGAESCSNYRSL
KTRSSSVSVTVAEGALVVKPKGGENVREEVLDEISRKAKRHKLNVGHGLSNPHPPPGRPM
CLRLPPGVVGDFLQVSEVFWRFREILGLGEAFSSEKLEQEIVNPLFDGFFLDKYGKEVHR
SEMNISDKDCTASKILSLLDESRQPFSSENTSASVLKETKAGNSTGFNISYSSRGPCFGE
LLTKTHISLLQVLICELQSKVAAFVDPNFDSGESRSRRGRKKDDSTLSAKKNKLHMLPVN
EFTWPELARRYILSLLSMNGNLESAEIAARESGKVFRCLQGDGGLLCGSLTGVAGMEADS
MLLAEATKKIFGSLTRENDVLSVEDDDSDGLDATETNACNGDIPEWALVLEPVRKLPTNV
GTRIRKCVYEALERNPPEWAKKILEHSISKEVYKGNASGPTKKAVLSLLAEVRGGDMVQK
SVKGTKKRTSIGVSDVIMKKCRAVLRDVAAVDEDKVFCTLLGRKLLNLNDNDDDGLLGSP
AMVSRPLDFRTVDLRLAVGAYDGSTEAFLEDILELWSCLRVMYADQPDSLELVETLSEKF
KSLYEAEVLPLVQKLMDYRKLECLSAEMRKEIKDIVVSVNKLPKAPWDEGVCKICGVDKD
DDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAKGMAQDALESNKLVRRRKGRK
YQGELTRGSMETTARLVDVMEGKDYWEFSAEERILLLKLLCDELLSSSLVHQHLEQCAEA
LIEMQQKLRSLSSEWKNTKMRQEFLTAKLAKVEPSILKEMGEPQNSSSFADYRGCNQQQE
SVGDRVPHDDDASSAAFLNNNQGKAPLETDAQTGESNVISRENKIPTPEKVTSPGRNESP
IEVTDHMSCEREDTTETLDKSAGRNHETHTIKPNAVELKTAHDASSVASQELQACQQDLN
ATSNEIQNLQQSIGSIESQILRQSIRRDFLGSDASGRLYWGCYFAEEHPRILVDGSMSLQ
KSVQVDLTGSKVPSPFLHAVDHGRLMVSPWTYYETEAEISKLVLWLHDDDPKERGLRESI
LCWKRLRFGDLKREIKQAENSSSPTLPGNLVTKAAMSMEKRYGPCIKLEIETYKKRGKKT
KFAEREKLCRCECLESILPSMIHCLVCHKTFASDDEFEEHAESKCVPYSLATEEGKEKYD
SSKAKESLKSDYLSVKSSAGKDKAEISNVSELDSGLIRYQEEESISPYHFGDICSKFVTK
DSNRDLVNEIGLISSNGSPTFLSLPSIHFNDSMLISATGSKLDGGDSGDQVMFTGSEANG
EDLNSESLDRSVTNDLGSPLNKLNGVGFGNSEEKNKNSTGSGLKGYCVVPQASLKRVTGK
ALQVFRFLKTNLLDMDVALPEEALRPSKSHPDRRRAWRAFVKSAQSIFELVQAAIVVEDM
IKTEYLKNEWWYWSSLSAAVKISTLSALSLHIFSLDAAIMYDKSITESDPMDETKEIGLQ
EQKSQAVTDTQERSSRANRRSGKKRKEPEGS
NT seq
6396 nt
NT seq
+upstream
nt +downstream
nt
atggaactcactgattctacgaaaccgcaactcggagagagcaggagcgccgctctcgac
gaagacaatcgctcctttctcggcatcgatctcaacgaaatcccttccgccggcgtcgtt
actcctggcggcgctgtccaggacgacgacggagagtacgaacccgttgaagttgttagg
tcaattcacgataacccggacccagcgcctggagcccccgcggaggttcctgagccggat
cgggatgccgcgtgcggcgcctgcggaaggccggagtctatggagctcgtagtagtctgc
gacgcttgtgagcgagggtttcatctgtgctgtgttagcgacggagcggaggctgctcct
tccgctgattggatgtgcagcgactgtgttaccggtggcgagaggagcaaactgtggccg
ttgggggtgaagtccaagcttatcctcgatatgaacgcctcgccgccgagtgatgccgag
ggttacggaggcgaggatacatcagattcgagaaagcagcatatgctggccagcacttct
tgcatggggaacacttttgaacattcaagctttctgattcctggtagagctcatacttta
ggttttggcttcccatcagacctgggcaacagatttccctctttggatccaagcgagctc
ttgttgcaaaatctcaggcatttcatatctgaaaggcacggcgtcgtattagaagatggt
tggcgtgtcgaatttaaacaacctttaaatggatatcatctctgtgcagtgtattgtgcc
ccgagtgggaaaacatttagttcaatacaagatgttgcttcttatctgggcttggctact
aatggtaactatcgctgtatggatgctgaaatcacgaatcagacttctcttcctccagaa
agattgaatatgcccaagagaagaaagacatcaagatggccaaacaacaatttccctgag
caaaagggtagttcagtgagtgctcagctcagtcgttttccatatagtggtcatacgatg
cccccttctgatactctttttcaggctgttgaatctcttagctctgggaataatggatgt
ggttgtgaggaagctaataaaggacttcctatgcaatttgaagatttctttgtcctgtcg
cttggacgaattgacataagacagtcttaccacaatgtcaacatgatttatccaatagga
tataagtcctgctggcatgataaaatcacagggtctttatttacttgtgaagtatctggt
ggttgttctgggcctgttttcaagattacaaggtcaccatgctctacatcatttcttcca
gttggatcgactgtcttctcatgcccaaagattgacaaaatggtggaacagaacattgac
aaacgaggtgatcgtagagacagtattcaagacaatgatgacactgttgagatccttctt
tcagatccatccccacctcttggagatgatatattgtcttgtttacgggagaagaatatc
tccaatacattcaattgcctgcgctcggaagttggtccttctctactagacttaaataat
actctatcctataatcagcagcatgggatagaaattggcgagattgttgtggaagaagat
tcattgtctgttgcatggaaaaaggtgtctcaaaaacttgttgatgcatgttttaatgtc
ctaaagcacaagggttccatgaactttcgttgcaagcatgttgacagagaaacaagggaa
atcaactgggatacagtaaatgagaaagacgatgtgattttatctttgtcaagattctgc
tgttctttggctcctaacagtgctacacgtggtgaaaaggatagtagcgagattgcatct
ctagttgatgttttgtcaaggtggcttgatcaaagcaggtttggaattgatgcagatttt
gtacaggaaatgattgaacgtatgcctggtgccgaatcatgttcaaattataggtctctg
aagactagaagttcttctgtttccgtaactgtagcagaaggagcgcttgttgtcaaacca
aaaggtggagaaaatgtcagggaagaagttcttgatgagatatctcggaaagccaaaagg
cataaactaaatgttggtcatggtttaagcaatccacaccctcctcccgggaggccaatg
tgtttgaggcttcctcctggggttgttggtgacttccttcaggtatctgaagtgttctgg
cgtttccgtgaaattttgggtttgggagaggctttctcatctgagaagcttgaacaggag
attgtcaatccactgttcgatggtttctttcttgataaatatgggaaagaagttcataga
agtgagatgaacattagtgataaggattgcactgctagtaaaattttgtctttgttggat
gaatctcgccaacctttttcttctgaaaatacctctgcttctgtactaaaagagacaaaa
gcagggaattctaccgggttcaacatttcatattcctctcgtgggccgtgcttcggtgaa
cttctaacaaagactcacatttcgcttctgcaagtgctaatatgtgagttgcaatccaag
gtagctgcatttgttgatccaaactttgattcgggagaatcaagatctagacggggacgg
aaaaaggatgacagtacactttctgctaaaaaaaataagctgcatatgcttcctgttaac
gagttcacatggcctgaattggcccgtaggtacattttgtctcttttatcaatgaatggg
aacctcgaatcagcagagattgctgcccgtgaaagtggtaaggtattccgttgcttacaa
ggggatggtggtttgctctgtggttcactcacaggagtagctgggatggaagccgattca
atgttacttgcagaggctacaaaaaaaatatttggttcgttgacaagagaaaatgatgtt
ctctctgtggaagatgatgattctgatggccttgatgctactgagacaaacgcttgcaat
ggtgatattccagagtgggcactggttctggaacccgtgagaaagcttccaacaaatgtt
gggactagaatcagaaagtgtgtctatgaggctttagagagaaatccaccagagtgggca
aagaagatattggagcattccatcagtaaagaagtatataaaggcaatgcatcaggaccg
acaaagaaagctgtgctctcgttgctagccgaagttcgaggtggagatatggtgcagaag
tctgtcaaaggaaccaaaaagaggacgtctattggtgtatctgatgtcattatgaagaaa
tgtcgtgctgtgttgcgtgatgttgctgctgtagacgaggataaagtgttttgcacttta
ttggggcgaaagttactgaatttgaatgataatgatgatgacggactcttgggatcacct
gcaatggtttcgcgtcccttagactttagaactgttgatttgaggttggctgttggtgcg
tatgacggatcaactgaagcttttctcgaggatattcttgagctgtggagttgtttacgt
gttatgtatgcggatcagcccgattctttagaactggttgaaacattgtcggaaaaattt
aagtcactgtacgaagctgaggttctacctcttgttcagaaacttatggactacagaaaa
ttggaatgtctaagtgcagagatgaggaaggaaattaaggacattgttgtttcagtaaat
aagcttcccaaggccccgtgggatgagggggtatgtaaaatatgtggcgttgacaaagat
gatgacagtgttctcttgtgtgatacgtgcgatgcggagtaccacacatattgtttgaat
ccccctcttattagaattccagatggaaattggtattgtccctcatgtgtcattgccaag
ggcatggctcaggatgctttggaatcgaacaaactagtcagacggcggaaaggtagaaag
tatcagggggaacttacccgaggttctatggaaacaactgctcgcttggtagatgtgatg
gaaggaaaagactactgggagttcagtgctgaggagagaatcctgctgcttaagcttcta
tgcgatgaactgcttagctcatcccttgttcatcaacacctcgagcagtgtgccgaagcc
ttaattgaaatgcagcagaagttgcgctctctttcctcagaatggaaaaacacaaaaatg
cggcaggagtttctgacggctaaactcgcaaaggttgaacctagtattctaaaggaaatg
ggcgaaccacaaaattcaagtagctttgcagactaccgtggatgtaatcaacaacaggag
agtgttggagacagggttcctcatgatgatgacgcttcctctgctgcgtttcttaacaat
aatcagggaaaagctccgcttgagacagatgctcagactggagagtcaaatgtcatttcg
agagagaacaaaattcccacccccgaaaaagttacatcccctggaaggaacgagtcgcca
atagaggtaacggatcatatgtcttgtgaaagagaagatactacagagaccttggacaaa
tcagctggaaggaaccatgaaacacacactataaaacccaatgcggtggaattgaagaca
gcacatgatgcatcttctgtggcttcccaagaattgcaggcttgtcaacaggatttgaat
gccactagtaatgaaatacagaatctgcagcaatcaatcggaagcattgaatcacagatt
ctaaggcaatctatacgaagagactttctgggaagtgatgctagtggtcgtctatattgg
ggttgctacttcgcggaagaacatcctcgtattttggttgatggaagcatgtcgttgcag
aaatctgtacaagttgacttgacaggttcaaaagttccctccccatttctccatgccgtt
gaccatggaagattaatggtctcaccctggacatattatgaaactgaagcggagatcagc
aagcttgtcctatggcttcatgatgatgacccaaaagaaagaggcttgagagagtctatt
ttgtgctggaaaaggttacgatttggggatcttaaaagggaaatcaaacaagctgagaat
tcgtcctccccaacattgcctgggaatcttgtgacgaaggctgccatgtcaatggagaaa
agatatggtccatgcatcaaactagagatcgaaacctataaaaaacgggggaagaagaca
aagtttgcagagcgagagaaactgtgtagatgcgaatgcttggaatccattttgccatcc
atgattcactgcctcgtatgccacaaaacatttgcaagtgatgatgaatttgaggagcac
gccgagagtaagtgtgttccatattcattagcaactgaagaaggcaaagaaaagtatgat
tcttcaaaagcaaaagaaagcctgaaatccgattatcttagtgtaaagtctagcgctggc
aaagataaagctgaaatatccaatgtttctgaacttgattctgggctgataagataccaa
gaagaagaatctatttccccatatcattttggggatatctgctccaagtttgtgacaaag
gattctaacagagatttggttaacgagattggtctgatcagttcaaatggaagtccaaca
tttctttcgttgccatctattcattttaacgactcaatgctcatatcggccactggcagt
aagctagatggtggtgattcaggggatcaggtgatgtttactggttctgaagccaatggt
gaagacttgaattctgaatcattggacagatcggtcacaaatgatcttggcagtccgctg
aacaaactgaatggagtgggatttggcaactcagaggaaaagaacaaaaactctacaggc
agtgggttaaaaggctactgtgtggttccacaggcgtctttgaaacgtgttactggcaaa
gctttgcaggttttcaggttccttaaaaccaacttgcttgatatggatgtggcactacct
gaagaagctttaagaccatcgaaatcacatccagatcgtagacgagcttggcgtgctttt
gttaaatcggcacaaagcattttcgagttggttcaggcagcaattgtggtagaagacatg
ataaagacggagtacttgaaaaatgaatggtggtactggtcttctctatcagcggcagtt
aaaatctcgacactctctgcgctatcccttcacatcttctccctcgatgcagcgattatg
tacgataaaagcataactgaatcagatcctatggatgagacaaaggagataggcttacaa
gagcagaagtcacaagctgtaactgatacacaagaaagaagcagcagagctaacagaagg
tccggtaagaaaaggaaagaacctgagggatcataa
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