Raphanus sativus (radish): 130496793
Help
Entry
130496793 CDS
T06014
Name
(RefSeq) protein EXPORTIN 1B
KO
K14290
exportin-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03008
Ribosome biogenesis in eukaryotes
rsz03013
Nucleocytoplasmic transport
rsz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130496793
03008 Ribosome biogenesis in eukaryotes
130496793
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130496793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130496793
03009 Ribosome biogenesis [BR:
rsz03009
]
130496793
03016 Transfer RNA biogenesis [BR:
rsz03016
]
130496793
03036 Chromosome and associated proteins [BR:
rsz03036
]
130496793
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130496793
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
130496793
Pre-60S particles
130496793
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130496793
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130496793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Motif
Other DBs
NCBI-GeneID:
130496793
NCBI-ProteinID:
XP_056845238
UniProt:
A0A6J0K1B6
LinkDB
All DBs
Position
6:complement(3063166..3070398)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLLDLSQPIDVALLDATVGAFYSTGSKDERAAADNILRELKANPDTWLQVVHILQS
TKSTHTKYFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSGDEGSFRSERLYVNK
LNVILVQIVKHEWPGKWRSFIPDLVKAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKESLNSEFLLIHELCLYVLSASKRPELIRATLSALHAYLSWIPLGYIFESPLLET
LLKFFPEPAYRNLALQCLSEVAALDCGDFYNGQYVKMYSIFMGQLQAMLPLDINIPEAYS
NGSDEEQAFIQNLALFFTSFFKSHIKVLESAPEIVSLLLVGLGYLINISYVDDTEVFKVC
LDYWNSLVSELFTLHHHVGHPGLTPSLFGLQMACLPRTAGSIKPEVTERQKLYADPLSKL
RGLMISRMAKPEEVIIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLGHEDTERQM
LSKLSKQLSGEEWTWNNLNTLCWAIGSISGSMDVDQENRFLVMVIRDLLSLCEIIKGKDN
KAVIASNIMYVVGQYSRFLRAHWKFLKTVVHKLFEFMHETHPGVQDMACDTFLKIVQKCR
RKFVILQVGEKEPFVSELLSGLVTIVGDLEPHQIHTFYESVGSMILSETDPQKRSEYIQR
LMDLPNQKWTEIIGQARQNADILKDPDMIRTVLSILQTNTRVATSLGTYFLSQISLIFLD
MLNVYRMYSELVSSNIAEGGPYASRTSVVKLLRSVKREILKLIETFLDKAEYQPHIGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKVNMQDEVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATYCFPALVQLSSEQLKLVMDSVIWAFRHTERNIAETGLNL
LLELLKKFQKSDFSNQFYRTYFMQIEQEIFAVLTDTFHKPGFKLHVLVLQHLFSLVESKS
LTEPLWDASTVLQQYPNNAAFVLEYTIKLLSSSFPNMTTSEVTQFVNGLYESRSDIARFK
ENIRDFLVQSKEFSAQDNKDLYAEEAAAQIERDIQKMLLVPGLVAPNEIQDDMADS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgagaagttactggacttgagtcagcctatcgacgtcgctttgctcgacgcc
accgttggggccttctactcaacaggatctaaagatgaaagagctgctgcggataatatc
ctgcgggaattgaaagccaaccctgacacctggcttcaagtggttcacattttacaaagc
accaagagtacacataccaagtactttgctcttcaggtgctagaaggtgttatcaaatac
aggtggaatgccttacccgttgaacaacgtgatggaatgaagaattacatctctgaagtc
atcgtccagctctcaggggatgaaggatctttcagatcggaaaggctttatgtcaacaag
ttaaatgtcattctcgttcagatcgtgaaacatgagtggcctgggaagtggaggagcttt
attcctgatttagttaaagctgctaaaactagcgagactatctgtgagaattgcatggct
attttgaagctcctgagcgaagaggtctttgatttctcaagaggagagatgactcagcag
aagattaaggagctgaaagagtccctaaacagcgagtttctactcattcatgagttgtgc
ctatatgttctctcagcttccaaaagaccagagcttatacgtgctacgctctctgcattg
catgcctatctttcttggattccgcttggctatatattcgagtcacccttgctggagacc
ctccttaaattcttccctgagccagcatataggaatctcgctcttcaatgtctgtcagag
gttgcagctcttgattgtggggacttctacaatgggcaatatgtcaagatgtacagcatt
ttcatgggacagttgcaggcaatgcttcctttagatatcaatatcccagaggcatattca
aatggaagtgacgaggaacaggcttttatccagaacttggcactgtttttcacttcattt
ttcaagtcacatataaaagtcctagaatctgcacccgagattgtttctttactacttgtt
ggtctcggatatctcattaacatttcatatgttgatgacactgaagtattcaaggtttgt
ttggactattggaattcactagtttcggagttatttacgttgcatcatcatgtcggccac
cctggtctaactccaagtctgtttggattgcaaatggcttgccttccgcgtacggctggt
agcatcaaaccggaagtcacagagcgacaaaaactttatgctgatccattgtcaaaatta
agggggctcatgattagtcgtatggctaagcctgaagaagtgataattgttgaagatgaa
aatgggaatatagtccgtgaaactatgaaggataatgatgttcttgtccaatataagata
atgcgggagacattaatctacctctcgcaccttggtcatgaagatactgaaagacagatg
ttgagtaagctaagcaaacagttgagtggggaggaatggacatggaacaatctgaacact
ttatgctgggctattggatctatttctggttccatggatgttgaccaggaaaacagattt
ctggtgatggttattcgtgatttgttaagtttatgtgaaatcatcaagggaaaagacaat
aaagctgttattgcaagcaacatcatgtatgttgttggacagtactcgaggttcttaagg
gctcactggaagtttctgaaaacagttgttcataagctgtttgaattcatgcatgagaca
catcctggtgttcaggacatggcgtgtgatacattcttgaaaattgttcaaaaatgcagg
cgcaaattcgttattcttcaggttggagagaaggagccatttgtatctgaacttctgtca
ggccttgttactattgttggagatcttgagcctcatcagattcacactttttatgaatct
gtcggtagtatgatcctgtcagaaacagatcctcagaagaggagtgaatatatacagagg
ttgatggatctcccgaatcagaaatggacagaaattataggccaagcacgtcagaatgca
gatatcctcaaagacccagatatgatacgtactgtgcttagtatcctccagacaaatacg
agagttgcaacttcactaggaacatatttcttatctcaaatctcgttgatctttttggat
atgctgaatgtttatagaatgtacagtgaactcgtgtcaagcaacattgctgaaggtggc
ccgtatgcttcgaggacatctgttgttaaacttctaagatctgttaagagagaaatcctt
aagttgatagaaacttttctagacaaagctgaataccagccacacattggcaaacagttt
gttccaccgatgatggatccagttcttggtgactatgcaagaaatgttcccgatgcaagg
gagtccgaagttttatcactcttcgcaacaataataaacaagtacaaggttaatatgcaa
gatgaagtgcctcgcatttttgaagctgttttccagtgcactttggagatgatcactaag
aactttgaagattatccagagcaccgcctcaagtttttctcgttacttcgtgctattgcg
acttattgtttccctgccttggtacagttgtcaagtgagcaactgaagctagtgatggat
tcagttatctgggcgtttaggcataccgaaagaaacatcgctgaaacagggctgaatctc
ttgctggagctgctgaaaaagtttcagaagtctgacttctctaaccaattctaccggacg
tactttatgcaaattgagcaagaaatattcgccgtcttgaccgataccttccacaagcct
gggttcaagcttcatgtgttggtgctacaacatctattttccctggttgagagcaaatct
ttgacggaacctctgtgggatgcttcaacagtacttcagcaatacccaaacaatgctgcc
tttgttcttgaatacaccatcaagcttctaagctcatcattcccaaatatgactacatct
gaggtgacgcaatttgtgaatggactttacgagtcgagaagtgacattgcgagatttaaa
gagaacatacgagacttccttgtacaatccaaagagttttctgctcaggataacaaagat
ctatatgctgaagaagctgcagctcaaattgagagagatatacaaaagatgcttttggtt
cctggacttgttgctcctaacgagattcaagacgacatggctgattcataa
DBGET
integrated database retrieval system
