Raphanus sativus (radish): 130497419
Help
Entry
130497419 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130497419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130497419
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130497419
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
130497419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
130497419
NCBI-ProteinID:
XP_056846169
UniProt:
A0A9W3C3M9
LinkDB
All DBs
Position
7:complement(21891431..21892708)
Genome browser
AA seq
323 aa
AA seq
DB search
MARFSISGGDDGEGSSNHQPRKRQRLPSIDEDEETAGSSGEEDEEEDDRLIESTSDDSDR
EVVIEEATTRQISSSRDSSLSVTLLDPDVLDCPICCEPLKLPIFQCDNGHLACSVCCTKV
RNICPSCTLPVGYIRCRAMEKVIETSRVSCPYAKYGCKEKMLYGNKFSHEKLCVFAPCSC
PVLDCDYTGYYKDLNTHVRAKHKDEVVPFVWDVSITIRLDKTTILQEENDGEVMVVQVFR
GLHVVYVVVSCIAPSAREVGNFSYYLVTVPLAVDGSLVQRSMMKNIQKLRNEQPEDGFMV
IPSYMLSGSSRILLGRGRAYGHA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattctcaatatctggaggcgatgacggagaaggatcaagcaaccatcaaccc
cgcaagcgacaacgacttccttccatcgatgaagatgaagaaaccgccggaagttccggt
gaagaagacgaagaagaagatgaccgtctgattgaatccacgagcgatgacagcgatcgt
gaagtggtgatagaagaggcaacaaccagacagatctcttcgagcagagattcttctctt
tccgtaacgcttttggatccagatgttctcgattgccctatttgctgcgagcccctcaag
cttcccatctttcagtgtgataatggtcatctagcttgttctgtgtgctgcaccaaagtc
aggaacatatgtccctcctgcacgttacccgttggttacattcgctgcagggccatggag
aaggtcatagaaacatctagagtctcttgtccttacgccaagtacgggtgtaaggagaaa
atgttatatggtaataaatttagccacgagaagctttgtgttttcgccccgtgttcctgc
cccgtacttgactgcgactacactggctattacaaggatctcaacacccacgtacgtgct
aaacacaaagacgaggtggttccttttgtgtgggacgtttctataaccattagattggat
aagaccacaatccttcaggaagaaaacgatggggaagtgatggtagttcaagttttcagg
ggtttgcacgttgtgtatgtcgttgtgagctgtattgctccttcggcacgggaagtggga
aacttctcatactatctggtgactgtacctttagccgttgatggctcgcttgtgcagcga
tccatgatgaagaacattcagaaattgaggaatgaacaaccagaagatggtttcatggtg
attccttcctatatgctgtctggtagttcgcggattttacttggccgtggccgggcttat
ggtcatgcctga
DBGET
integrated database retrieval system
