KEGG   Raphanus sativus (radish): 130498492
Entry
130498492         CDS       T06014                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00900  Terpenoid backbone biosynthesis
rsz01100  Metabolic pathways
rsz01110  Biosynthesis of secondary metabolites
Module
rsz_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    130498492
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rsz01006]
    130498492
Enzymes [BR:rsz01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     130498492
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     130498492
    2.5.1.29  geranylgeranyl diphosphate synthase
     130498492
Prenyltransferases [BR:rsz01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   130498492
SSDB
Motif
Pfam: polyprenyl_synt UbiA
Other DBs
NCBI-GeneID: 130498492
NCBI-ProteinID: XP_056847880
UniProt: A0A9W3C8N2
LinkDB
Position
8:complement(7812258..7813426)
AA seq 361 aa
MASVTIISSCVHHNLHRHPSPSILTPFKTPRSSSFINSKPIVINPKRTVSSSSSSHIRIY
KSSSFDFTSYIVRKAESVNKALDLAVPLQEPLKIHEAMRYSLLAGGKRIRPVLCLAACEL
VGGEPSVAMPAACAVEMLHTMSLIHDDLPCIDNDDLRRGKPTNHRVFGENVAVLAGDALL
PFAFEHLVTATSPEVSPVRLVRAVGELARPVGVEGVAAGQVADISSEGLDSNDVGLEHLE
FIHLRKTAALLEASAVLGGIVGGGSDDEIERLRQYARCIGLLFQVVDDILDVTKSSQELG
KTAGKDLVADKLTYPKIMGLEKSREFAEKLSRDARDQLLGFGSDKVAPLLALASYIANRQ
N
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcttcagtaacaattatcagttcatgtgttcaccacaatcttcaccgtcatccttct
ccttctatccttactccattcaaaacaccaagatcttcttccttcataaattctaaacct
atcgtcatcaacccaaaacgcaccgtttcatcatcatcatcttcccacatccgcatttac
aaatcttcatccttcgacttcacgtcttacattgtccgtaaagccgagtccgtcaacaaa
gccttggacctggccgttcctctccaagaaccgctcaagatccacgaagccatgcgctac
tccctcctcgccggaggcaaacgcatcagacccgttctctgcctcgccgcttgcgagctc
gtcggaggcgaaccctccgtcgctatgccggcagcttgcgccgtcgaaatgctccacacc
atgtcgttgatccacgacgacctcccgtgcatcgacaacgacgatctccgccgcgggaaa
cccactaaccacagagtcttcggcgaaaacgtcgccgttttggccggagacgcgcttctt
ccctttgcattcgagcatctagtgacggccacgagtcccgaggtctctccggtgaggctg
gttcgagccgtgggagagttggctagacccgtcggcgtcgagggcgtcgcggctggacaa
gtggctgatataagcagcgaagggttagactcgaacgacgtcggtttggagcatttggag
tttatacatttgcgcaaaacggcggcgttgcttgaagcctctgcggtgctcggagggatc
gttggtggagggagtgacgatgagatcgagaggctgaggcagtacgcgaggtgtataggt
ttgttgtttcaagtggttgatgatatcttggacgtcacgaaatcgtctcaagaattaggt
aaaactgctgggaaagatttggttgctgataagttgacgtatccgaagattatggggttg
gagaaatcgagagagttcgctgagaagttgagtagagatgctcgtgatcagcttttaggg
tttggttccgacaaggtggctcctttgttggctttggctagttacattgccaatagacag
aactga

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