Raphanus sativus (radish): 130498659
Help
Entry
130498659 CDS
T06014
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130498659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130498659
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
130498659
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
130498659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_HTH
FAN1_TPR
PADR1_N
Motif
Other DBs
NCBI-GeneID:
130498659
NCBI-ProteinID:
XP_056848183
UniProt:
A0A9W3C9N2
LinkDB
All DBs
Position
8:complement(23653280..23657387)
Genome browser
AA seq
886 aa
AA seq
DB search
MLTGHESLLRLIGKRRRSLPNRQNLLSVPTPNSLNLDVNDSGNDSSTFSGVLSTKKASVF
CSSSSLLSDSEITLSTDDLSLSRRKKKKRRLTQTTLLQWSGSKQSEDTLFIHTQHHHQQQ
SILDCNLDYDDGSCSEEVSKTVAALDEANGGDEAIHTFIVGRKFSDVQVLETGAKISLLR
HPQNIKDPNAIKVLYAESELSEMLGYLPKDVSQCLSPLIDEYDLKFEGTITSVPKNSSEA
VPIKVVCHKMTSDGWKESESAGEDFKLLWEKFLQVVEHQMQFPPKTTRYQLNFNVLVQEV
LRSCSHLFTDDEKAFLESFPSLSEDSQRLFIRLYTRKVPWFRLSNISYPEVSDSLQALKD
LTVRGFMTSVEDANDLSYQMMKEITELLNVTELRDILSVNKVNSRSSRKRDLINSLCSYY
NDGTRMNIGTMILERTGLCAKISSTAETLIWRVERLFFLNGEQDLSSFVLLDLGIIKYPT
YKCIDSEQIFSDRTKLLAYEEAIEVAQLMDESLDSEDSGTVLNCIRIAETRITSSSSEPA
LLAAFNCFTAPWVYSKMVLLGVSFLENQKRYNQAVHLLRRLLSCFSCDGRRGYWTVRLST
DLEHMGRPNESLSVAEQGLLDPWVRAGSRIGLQRRILRLAKPPRRWKPPTFPNLNDNKIP
EVTIQGRSLNCEVGMKNRFYGEDGEQCGVEKLALQYYNGEGGGWQGMHTENSIWLTIFGL
LMWDILFSDVPGVFQTRFQTAPLDLDTESFYLTRKEAIESQLEKVANGMAEEILIISYET
HRGTACRGVAWERFSLEELRAAVACVGGKCVASLCRYLAQDYRSWCSGMPDLLLWRFKEN
GYEGEAKLVEVKSEKDRLSEQQRAWLLLLMDSGFHVEICKVRPACA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccggacatgagagcttgcttcggttgatcggaaaacgccgccgatcactcccc
aaccgccagaatcttctctccgttcctactccgaactcgttgaatctcgatgtcaacgac
tccggcaatgactcgagcacattctctggtgtgttatcaactaagaaagcttctgtcttt
tgctcatcttcttcgttgcttagcgattctgaaatcactttgtccacagatgatttgagt
ctatcaagaaggaagaagaagaaacggagattaactcagaccactcttcttcagtggtca
ggttcgaaacaatctgaagatactcttttcatccatacccagcaccaccaccagcagcaa
tcaatactcgactgcaatcttgattatgatgatggctcatgtagtgaggaggtttcgaaa
actgtggctgctttagatgaagccaatggtggtgatgaagctattcatacctttatagtt
ggtaggaagtttagtgatgttcaggttttagaaactggggcaaagatctctcttttgaga
caccctcagaacatcaaggatcccaacgctattaaggttctttatgcagagtccgagttg
tctgagatgcttgggtatctacccaaagatgtttcccagtgcttgtccccgcttatcgac
gagtatgaccttaagtttgagggaacaataacttctgttcctaagaattcttctgaagct
gttcctattaaagttgtttgtcacaagatgacatctgatggttggaaagaaagtgaatct
gctggtgaagattttaagcttctgtgggagaaatttcttcaggttgttgagcatcagatg
cagtttcctcctaaaacgacgagataccaattgaacttcaacgtgttggtacaagaggtt
ctcagaagctgctctcacctatttacagacgatgaaaaggcattcttggaatccttccca
tctctttcagaagatagccagagacttttcatccgtctttacacacgaaaagtaccttgg
ttcaggctatcaaatatttcataccctgaggtatctgattctcttcaagctctgaaagat
ctaacagttaggggattcatgacttcagtggaagacgcaaatgatctaagttaccaaatg
atgaaggagatcacagagttgcttaacgtcactgaactgcgtgatatcttatctgtaaac
aaggtgaacagccgcagttcaagaaagagagaccttataaattcactttgttcttattac
aatgatggaacgaggatgaatataggaacaatgattctggaaagaacaggactatgtgct
aagatatccagtacagcagaaactctcatatggcgtgttgagagacttttctttctcaac
ggggagcaagatctatcctcttttgttctgctggatcttggtattatcaaatatccaact
tacaagtgcattgactcagagcagatattttcagaccggactaagctattagcatatgaa
gaggccattgaagtggctcagttgatggatgagtctcttgacagtgaggattctgggaca
gtgttgaactgcatcaggattgctgagacccgcataactagttcatcttcagaacctgct
ctcctagcagcttttaattgctttacagctccatgggtttactcaaagatggttctttta
ggagtctcctttcttgagaaccaaaagaggtataaccaagcagttcatctactgagacgg
ctgcttagttgcttcagctgtgacgggagacgaggatactggacagtcaggttatcaaca
gatttggagcacatgggacgtccaaacgagagtctttcagtagcagaacaaggactattg
gatccttgggtgcgtgctggttcaagaataggtttgcaaagacgcattcttcgtctagca
aaacctccaagacgctggaaaccccccaccttcccaaatctcaacgacaacaagatccct
gaggtcaccattcaagggagatcactgaactgtgaagttggcatgaaaaacaggttttat
ggagaagacggagagcagtgcggagttgagaagctcgcattgcagtattacaatggagaa
ggaggaggatggcaggggatgcatacagagaatagcatctggttaaccatttttgggctt
ctcatgtgggacattctgttttctgacgtccctggtgtcttccaaacccggttccagact
gctccactggacttagatactgaatccttctatctaaccaggaaggaagcaatagagtca
cagctcgagaaagttgcaaacggaatggctgaagagatactcatcatctcatatgaaaca
caccgtggaacagcgtgcagaggagtggcgtgggagcggttttcgttagaggaactgaga
gcagcggtggcttgtgttggaggcaagtgtgtagcatcgctttgccgatatctagctcaa
gactacaggagctggtgcagtggaatgcctgatctgcttctgtggcggttcaaggagaat
ggttatgaaggtgaagctaagcttgtggaagtaaaatcagagaaagataggttatcagaa
cagcaacgtgcttggcttctgcttctaatggattcaggcttccatgttgagatttgcaaa
gtaagacctgcttgtgcttaa
DBGET
integrated database retrieval system
