Raphanus sativus (radish): 130498769
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Entry
130498769 CDS
T06014
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130498769
03036 Chromosome and associated proteins [BR:
rsz03036
]
130498769
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130498769
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130498769
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130498769
microRNA pathway
RISC loading complex
130498769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
130498769
NCBI-ProteinID:
XP_056848339
UniProt:
A0A9W3C9X0
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All DBs
Position
8:23616942..23622849
Genome browser
AA seq
1089 aa
AA seq
DB search
MVRKKRTDGSSEGGEGSGSREGGQQSGVGRGGYQQGGGRGGGGQQQGGRGYGPQSQQGGR
GGGRGRGYGQPPQQYGGPRGDQPPQQYGGPRGDQPPQQYGGPRGGQPPQQYGGPREGQPP
QHQHQQQYGGPRGGPPRGGYGRGGAPSAGQPQRQSVPELHQATSPTYQAVSSQPTPSEVS
PIQMPDPSPPVQEFEQLSIEQGATSQAIQPIPSSSKAFKFPMRPGKGQVGKRCIVKANHF
FAELPDKDLHQYDVTITPEVTSRGVNRAVMKQLVELYRESHLGRRLPAYDGRKSLYTAGP
LPFVSKEFRILLHDEEEGAGGQRREREFKVVIKLAARADLHHLGMFLQGKQADAPQEALQ
VLDIVLRELPTSKYTPVARSFYSPDIGRKQSLGDGLESWRGFYQSIRPTQMGLSLNIDMS
STAFIEALPVTEFVCQLLNRDIRSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISG
LTAVATRELTFPVDERNTQKSVVEYFYETYGFRIQHTQLPCLQVGNSNRPNYLPMEVCKI
VEGQRYSKRLNERQITALLKVTCQRPQEREKDILRTVELNDYSHDPYAKEFGIKISASLA
SVEARILPPPWLKYHESGREGTCLPQVGQWNMMNKKMINGGTVSSWICINFSRQVPDNMA
RSFCQELAQMCHISGMAFNPEPVLPPVSARPEHVEKVLKTRYHDAMAKLSQGKEIDLLIV
ILPDNNGSLYGDLKRICETELGIVSQCCLTKHVFKMSKQYMANVALKINVKVGGRNTVLV
DALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHR
QELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRDGVSEGQFYQVLLY
ELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQNHNDRNSVDRSGNILPGTVVDSKI
CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIV
PPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMGGRNMRGPHVNAAVRPLPPLKD
NVKRVMFYC
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaactgatggttcgtctgaaggaggtgaagggtctggctcccgt
gaaggtggtcaacaatcaggtgttgggcgtggtggttatcagcaagggggaggaagagga
ggaggaggacagcagcaaggtggaagaggttatggtcctcagtctcaacagggaggtcgt
ggtggtggccgtggccgtggatatggccagccaccacagcagtacggtggaccaagagga
gaccaaccaccacagcagtacggtggaccaagaggagaccaaccaccacagcagtacggt
ggaccgagaggaggccaaccaccacagcagtacggtggaccaagagaaggccagccacca
cagcaccaacaccaacaacagtacggtggaccaagaggaggacctcctcgaggtgggtat
ggccgtggtggtgcaccctctgctggacagccacagagacaatcagttcccgagctgcat
caagctacctcaccaacttatcaagcggtgtcttctcagcctacaccgtctgaggtgagt
cctatacagatgccggatccttctcctccggtacaagaatttgaacagctctctattgaa
caaggagctaccagtcaggcaatccagcctattccatcttccagcaaagctttcaagttt
ccaatgcggcctggtaaaggacaggtcggcaagcgttgcattgttaaggccaaccacttc
tttgctgagttgcctgacaaagatttgcaccagtacgatgtcactattactccagaagtc
acatcaaggggtgttaatcgtgctgtgatgaaacagttggttgagttgtatcgtgagtca
caccttggaagacgtcttcctgcatatgatggtcgcaaaagtctctacactgctggaccg
cttccatttgtttctaaggaattcagaatcttgctccatgacgaggaagaaggtgctggg
ggacaaagacgagaaagggagttcaaagttgtgatcaagctagctgcacgtgctgatctg
catcacctagggatgtttctacaagggaaacaagctgatgccccgcaggaggctctgcag
gttcttgatattgttcttcgtgagcttccaacttccaagtatactcctgtggcccggtca
ttttattctcctgatattggaagaaagcaatcattgggggatggcttggagagctggcgt
ggattctaccaaagcattcgtcctacacagatgggtttatcactcaacattgatatgtca
tcgacagcattcatagaggcacttcctgtgactgaatttgtttgccagttgctgaatagg
gatattcgatcccggcctttatctgatgctgatcgtgtgaagataaaaaaggctcttaga
ggtgtcaaggttgaagtgacccatcgaggaaatatgcgccgaaagtaccgcatttctggc
ctgactgctgtggccactcgagaactgacatttcctgtggatgaaagaaacacccagaaa
tctgttgttgaatacttctacgaaacatacggttttcgtattcagcacacacagcttccg
tgcttgcaagttgggaattctaacaggccaaattatctaccaatggaggtatgcaagatt
gttgagggtcagagatactcaaaaaggttgaacgagagacagatcactgctttgctgaag
gtgacttgtcagcgcccccaagaacgagagaaagatatcttgcggacggtggagctaaat
gattacagtcacgatccgtatgctaaggagtttggtatcaagataagtgcgtctcttgct
tctgttgaagctcgaattctgcctcctccatggctcaagtatcatgaatctggaagggaa
gggacttgtctgccacaagtcggtcagtggaacatgatgaacaagaaaatgatcaatggc
ggaacagtgagcagctggatctgcattaacttctctaggcaagtgccagacaatatggca
cgttctttctgtcaggaacttgctcagatgtgccacatatctggcatggcctttaatccg
gaaccagtcctcccaccagttagtgctcgcccggagcatgtggagaaagtcttgaaaact
cgatatcatgatgccatggccaagctatctcaaggaaaagagattgatctccttattgtc
attctgccagacaataatggatcattatatggtgatctgaagcgcatctgcgagaccgaa
ctcggcattgtgtctcagtgctgcctgactaagcatgtcttcaagatgagcaagcagtat
atggctaatgtggctctgaaaattaatgttaaagttggaggaaggaatacagtgcttgtt
gatgccttgtcaaggcgaattcctctggtcagtgatcgccctaccataatctttggtgct
gatgtaacccatcctcatcctggagaggattcaagcccgtccattgctgctgttgtcgca
tcccaggactggcctgaagttaccaaatatgctggactggtttgtgctcaggctcataga
caggagctcattcaggatctgttcaaagaatggaaggatcctcagaaaggggtggtgact
ggtggcatgataaaggagttacttatagccttccgtagatcaactgggcataagccgttg
aggatcattttctacagggatggagtcagtgagggacaattctatcaggttttgctgtat
gagcttgatgccatccgcaaggcatgtgcctcgctggaagcaggttatcagccaccagtg
acgtttgtggtggtgcagaagcgccatcacacgaggctgtttgcgcaaaaccataatgat
cgtaattcagtggatagaagtggcaacattttaccaggaactgtcgtggattcaaagata
tgtcaccccacggagttcgacttttatctctgtagccatgctggtattcagggcacttct
cgacctgctcattaccatgttctttgggatgagaacaacttctctgctgatggactccaa
tctctgactaataacttatgttacacgtatgctagatgcactcgttctgtatccattgtg
ccgcctgcgtactatgctcatctagcagcgttcagggctcggttctacatggagccagag
acatcagacagtggttcgatggctagcgggagcatggcacgtggaggtggtatgggtggt
agaaacatgcgtggtcctcacgtgaacgctgctgtgagaccactcccacctttgaaagac
aacgtgaagcgagttatgttctactgctga
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