Raphanus sativus (radish): 130498786
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Entry
130498786 CDS
T06014
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130498786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130498786
03036 Chromosome and associated proteins [BR:
rsz03036
]
130498786
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130498786
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130498786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
130498786
NCBI-ProteinID:
XP_056848362
UniProt:
A0A9W3CA77
LinkDB
All DBs
Position
8:complement(1685443..1691112)
Genome browser
AA seq
1033 aa
AA seq
DB search
MFGSSNPFGQSSSSSSPFGSQSLFGQTSNTSSNNPFAPAAATPFGTSSSPFAPQTGSSIF
GGTSTGVFGAPQASSPFGSTTTFGASSSPAFGSSTPTFGASPAASPFGGGSSGFGQGFST
PQSNPFGSTAQQSQPAFGNSTFGSSTPFGATSTPAFGASSTPAFGATSTPSFGASSTPAF
GATSTPAFGTSNQPAFGATSTPAFGASPTPAFGSTGNTFGNTGFGSGGAFGASSTPAFGA
SSTPAFGASNTPAFGAAASPAFGASSSPAFGASSTPTFGASNTSSFSFGSSPAFGQSTSA
FGSSAFGSTPSPFGAQGAQPQASTPTFGSSGFGQSPFGGQQQGGSRAVPYAPTVEADTAS
GTPAGKLESISAMPAYKDKSHEELRWEDYQRGDKGGPRPAGQSPGNTGFGVSAAQPNPFA
PSPAFGQTPANPANPFATSTSTNPFASQTPTIASSGFGAATSTFGSSPFGVTSSSNLFGT
TSSTATSAFGTTSAFGTTTSSPLFGSSSTPGFGSSPSIFGSAPGQGATSAFGNTQSSTLF
SSNPSMGQTGSAFGQTGSAFGQFGQNSTPAFGQTNMFNKPSTGFGNLFSSSSTLTTSSSS
PFGQTTPAGVTPFQSSQPGQASNGFGFNNFGQTQAANATANAGGLGFFGQGNFGQTPAPP
SSVVLQPVVVTNPFGTLPAMPQISINQSGNSSSIQYGISSLPVVDKPVPVRVSSLLTSRH
LLQRRVRLPARKYRPGDNGPKVPFFIDDEDTPSSTPKADALFIPRENPRALVIRPAQQWS
SRGKSSSVPKDRPTAPVHENGKSPDIATTDAVNHDKNGNGNLASGEERTHPSANGNQKSN
GTTSTDLAGEKDRPYRTLGGGHRAAGEAATDIEAIMPKLRQSDYFTEPRIPELAAKERAD
PGYCSRVKDFVVGRHGYGSIKFMGETDVRGLDLESLVQFNNREVIVYLDESQKPAVGEGL
NKPAEVTLLNIKCVDKKTGKQFTEGERVEKYKTMLKRKAEAQGAEFVSFDPVKGEWKFRV
DHFSSYKLDDDEA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatcatctaatccttttggacagtcatctagtagcagcagcccatttggttcc
caatctttgtttggtcagaccagcaacacaagtagtaataatccctttgctccagcagca
gcaacaccgtttggcacatcttcttcaccttttgctccacagacagggagttcaatcttt
ggtggcacttcaaccggtgtgtttggtgcacctcaagcctcttctccatttggctctacc
actacttttggagcttcttcgtcaccagcatttgggagttctactcccacctttggagct
tccccagcagcttcaccttttggtggtgggtcttctggttttgggcagggattttcaacg
cctcagtcaaatccttttggaagcacagcgcagcaatctcaacctgcatttggaaacagc
acttttggttcatccacaccttttggtgccacaagcacgcctgccttcggtgcatcgagc
acgcctgccttcggggctacaagcacaccctcgtttggtgcatcgagcacgcctgctttt
ggtgccacaagcacgcctgccttcggcacctctaaccagcctgcttttggcgccacaagc
acacctgcatttggagcttcaccgactccagcctttggtagcactggaaacacgtttggg
aacactggctttggttctggaggtgcttttggagcttctagcacccctgcttttggtgct
tcaagcactcctgcttttggtgcatcaaacactcctgcttttggtgcagcagcctctcct
gcctttggtgcatcaagttctcctgcctttggagcatccagtactcctacttttggtgca
tcaaatacctcatcgtttagttttggctcctccccagcttttggccagtccacatcagca
tttggcagcagcgcatttggctctacgccatctccatttggagcccaaggtgcgcagcca
caggcttcaaccccaacatttgggagttctggttttggtcaatcaccttttggtggccaa
caacaagggggcagtcgagccgtgccttatgcaccgaccgttgaggcagatacagccagt
ggtacgcctgctggaaagttggaatctatttctgccatgccggcatacaaagataaaagc
catgaggagctaaggtgggaagactaccagcgcggagataaaggtggaccacgtcctgct
ggtcagtctcctggaaataccggatttggtgtttcagctgctcagccaaatccttttgct
ccatcaccggcgtttggtcagacgccagcaaatccagcaaacccttttgcgacttcaaca
tctaccaacccttttgcctctcaaaccccaacaattgccagttcgggttttggagcggct
acttcaacttttggttcctcgccctttggtgtaacatcttcatccaatctttttgggaca
acgtcatcaactgccacttccgcttttggaacaacctccgcttttggaacaacgacctca
tcaccgttatttggttcgtcaagcactcctggatttggttcttctccatcaatatttggt
tcagctccaggacagggggcaacctcagcatttggcaacactcagtcatctactcttttc
agctcaaacccctcgatgggacagactggttctgcatttggacagactggttctgctttt
ggacagttcggacagaatagtactcctgcattcggccaaactaacatgttcaataagcct
tcgactggatttggcaacctattttcaagttcgtcaacattaaccacgtctagcagctct
ccatttggacaaaccacgcctgctggtgtgacaccttttcaatcatctcagccaggtcaa
gcatcaaatggttttggtttcaacaacttcggtcaaacacaagcagctaatgcaactgcg
aatgctggtggactgggattttttggtcaaggcaactttgggcaaacgcctgctccgccg
agctctgttgttttgcaaccggttgttgttacaaatccatttggaactcttcctgctatg
cctcagatttcaataaatcaaagcggaaactcatcgtcgattcaatatggaatctccagc
ttacctgtggttgacaaacctgttcctgttagagtatcatctcttctgacttctcgacac
cttttacaaaggcgggtgaggttgcctgcgagaaagtaccgtcctggcgacaatggtcca
aaggttccattcttcattgatgacgaggataccccctcaagtacaccaaaggcggatgct
ctattcattccaagggagaaccctagagctctagttatacgcccagctcaacagtggtct
tcaagaggcaaatcatcatcagttccaaaggaccgtccgactgctccagtacatgaaaat
gggaagagtccagacatagctactactgatgcagtaaaccatgacaaaaatggtaacgga
aatctcgcttctggtgaagaaagaactcatccatctgccaatggaaatcagaaatcaaac
ggcacaacaagcacagatctcgctggggagaaagaccgtccctacagaacactaggaggc
ggacacagagccgccggagaagcagcaacagacattgaggcgataatgccgaagctccgt
caatccgattatttcaccgagccacgaatcccagaactagcggctaaagaaagagcagat
cctggttactgcagtcgggtgaaagactttgtggtggggcgccacggttacgggagcata
aagttcatgggagaaaccgatgttcgtggactcgacttggaatctctggttcagttcaat
aaccgggaagtgattgtatacctagacgaaagccagaaaccagcggttggggaagggttg
aacaaaccggctgaggtaacgttgctgaatataaaatgtgttgataagaagacagggaaa
cagtttacagaaggagagagagttgaaaagtataaaacgatgcttaagaggaaagctgag
gcccaaggagctgagtttgtgtcgtttgatcccgtgaaaggcgagtggaagtttcgcgtt
gatcattttagttcctataagctcgacgatgatgaagcttag
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integrated database retrieval system
