Raphanus sativus (radish): 130498951
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Entry
130498951 CDS
T06014
Name
(RefSeq) phospholipase D delta-like
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00564
Glycerophospholipid metabolism
rsz00565
Ether lipid metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
130498951
00565 Ether lipid metabolism
130498951
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130498951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130498951
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
130498951
Membrane trafficking [BR:
rsz04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
130498951
Endosome - Golgi transport
Others
Others
130498951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
PLDc_2
Motif
Other DBs
NCBI-GeneID:
130498951
NCBI-ProteinID:
XP_056848796
UniProt:
A0A9W3CBF3
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Position
8:complement(8271314..8274990)
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AA seq
538 aa
AA seq
DB search
MEFLQGVMGTHDEETRKFFKNSSVKCILSPRYASNKLGLVKQKVVGTLFTHHQKCVLVDT
QTAGSNRKVTAFIGGIDLCDGRYDTPEHRILHDLDTVFKDDFHNPTFPSGTMAPRQPWHD
MHCRIDGPAAYDVLINFEQRWRKATRWKDLWLDDSLLRIGRISWILNPEFKYQIDGTLHV
PEDDPVVYVSNEDDPENWHVQVFRSIDSGSVKGFPKYVDEAEALHLDYDKRLVVDKSIQT
AYIQIIRSAQHFIYIENQYFIGSSYDWPDYNDAGADNLIPMELALKITSKIRAKERFAVY
VVIPMWPEGDPKSGPMQEILYWQSQTMQMMYYVIARELKSVQSNAHPLDYLNFYCLGKRE
QLPDGMPSTSGSAVSDSYKFQRFMIYVHAKGMIVDDEYVLMGSANINQRSMAGTKDTEIA
MGAYQPHHTWTNKGKHPRGQVYGYRMSLWAEHLGKTGYEFVEPADLECVKNVNEIAEGNW
RKFIDSEFSELQGHLIKYPLHVDIDGNVIPLPDYDSFPDVGGKIIGHDSKAIPDTLTT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctgcaaggagttatggggacacatgatgaagagactagaaagtttttcaag
aattcttctgtgaaatgtatactgtcacctcgttatgccagcaataagcttggattggtc
aaacaaaaggtagttggcactctcttcacgcaccatcagaagtgtgttcttgtagacact
cagactgctggtagtaatcgcaaagtcacagcttttattggtgggatcgatctttgtgac
ggccgctatgacacacctgagcaccggatattacacgatcttgacactgtatttaaggac
gattttcacaatcctacatttccaagtggtaccatggctccaagacaaccttggcacgat
atgcattgtaggatagatgggcctgcggcatatgatgttctcataaattttgagcaacgg
tggagaaaagcgacacgatggaaagatctctggctagatgattctttgttacggatagga
cgtatatcatggatactaaatccagagtttaaatatcagatagatggtactttacatgtt
ccagaggacgatccagttgtttatgtttctaatgaagatgatcctgagaactggcatgtt
caggtgttccgttctatcgactcaggatccgtgaaaggatttccaaaatatgtagatgag
gctgaggccctgcatctagattatgacaagcgtctagtagttgataaaagcatccagact
gcgtacatccagataatcagatctgctcagcatttcatatatatcgagaaccagtatttt
attggttcttcttatgattggcctgattataacgatgcaggagctgacaatcttattcct
atggagttagcactaaagattactagtaaaattagagctaaagaaagatttgctgtctat
gtcgtcataccaatgtggcctgaaggcgacccaaagtctggacctatgcaagaaatttta
tattggcagagccaaactatgcagatgatgtattatgttatagcacgagaactgaagtcg
gtccagtcaaatgcgcatcctctagactaccttaacttttactgccttggtaaacgagag
caacttccagatggtatgccatccaccagcggcagtgcggtatctgattcttataagttc
cagcgtttcatgatctatgtgcatgcaaaggggatgatagtagatgatgaatatgtactt
atgggatctgctaatatcaaccaaagatctatggccggcacgaaagataccgagatagcc
atgggtgcatatcaaccccatcatacatggactaacaagggaaaacacccacgtggccag
gtgtacgggtataggatgtccttgtgggcagagcatttaggcaaaactggatatgagttt
gtggagcctgctgatctagaatgtgtcaagaacgtgaatgaaatcgctgaagggaactgg
agaaagttcatagattcggagttctcagagttgcaaggccacttgattaagtatcctctg
catgtagacattgatggtaatgtaatccctcttccagattatgacagtttcccagatgtt
ggtggtaagatcattggacatgattccaaggctatccctgatactctaaccacgtaa
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