Raphanus sativus (radish): 130499169
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Entry
130499169 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130499169
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
130499169
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130499169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
CPSF_A
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR75_2nd
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
130499169
NCBI-ProteinID:
XP_056849114
UniProt:
A0A6J0KUK3
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Position
8:143392..145788
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AA seq
424 aa
AA seq
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MEEESHIEDGEKQTKLEVAPALISVHPFQKSVAVTVGSDLRVFDLIENRPVSLVDESEGP
SHKDSIRCIRYGANGKLFASAGDDKLVKIWSADSWHCLTTISSEKRVTAVAICSDDSYVC
YADKFGVVWVVQLDGINEGQILPSKKGVPLFGHYCSIITSLEFSTDGRYILSADRDFKIR
VTVFPKKPLQGAHEIQSFCLGHTEFVTCIAFVQNLELTQGYLMSGSGDSSVRLWDITSGS
LLDTCNISPMVKYLESNESEPTQVTVTDICALPNSSLAAVAIQSFQGIVLLNCDLSVHTL
SITKVIKIPGESFIPTSISFSTSTRSLWIVSGASNGSNHPGYTRVRLISCIETELSSILE
DEQIPGGTKLLEHLQGKFSIEESVMSAAAEAARAAMSSLLMKKQYSEENREFRKNNRNDK
KTTQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaatctcatatcgaagatggagaaaagcagaccaaactcgaggttgctcct
gcattgatatccgttcatccatttcagaagtctgttgctgtcactgtcggatcggatctt
cgtgtattcgatcttatagagaatcgtccagttagtttggtggatgaatctgaggggcct
tctcataaagattccattagatgtattagatatggtgcaaatgggaagctttttgcatct
gcaggagatgacaagctcgttaagatttggtctgctgactcttggcattgccttaccacc
atatcttctgaaaagagagttaccgcggttgctatatgcagcgatgattcatatgtttgc
tatgcggacaagtttggtgttgtttgggtggtccagctggatgggatcaatgagggtcaa
attttacctagcaagaagggtgtgccattgtttggccattattgtagtattattactagc
ctggagttttccacagatggtcgatatattcttagtgcagatcgggactttaagatcagg
gtgacagtttttcctaagaagcctctacaaggggctcatgaaatacagagcttttgtctt
ggacatacagagttcgtcacctgcatagcctttgttcagaatctagagcttactcaagga
tacctcatgtctggaagtggagattcaagtgttcgactgtgggatattacatctgggtct
cttctggacacatgtaacattagtccaatggtcaaatatttagagtctaatgaaagtgag
ccgacgcaagtcacagttaccgacatatgcgcactaccaaattcttctcttgcagcagta
gctattcaaagctttcaaggaatagtattgctaaactgtgatttatcagtccatactctc
tccattacaaaggtgattaaaatccctggagagagtttcatcccaacaagtatatctttt
agcacatctacaaggtcactatggatagtatcaggcgcctctaatggttcaaaccatcct
ggttatacaagggttcgtctcatctcgtgcattgaaactgaactatcttcaatccttgaa
gatgagcagattcctggagggacaaaactgttggagcatctgcaaggtaaattttcaata
gaagagagtgtgatgagtgctgcagcagaagctgcgagagcagcaatgtccagcctcttg
atgaagaagcaatactctgaagagaatagagagttcaggaaaaacaacagaaatgataag
aaaaccacacagtga
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