Raphanus sativus (radish): 130499219
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Entry
130499219 CDS
T06014
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130499219
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130499219
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
130499219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4
DUF1415
zf-C3HC4_3
DUF5063
DUF1319
Prok-RING_4
RING_XB3-XBAT31
zf-Nse
zf-C3HC4_2
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
130499219
NCBI-ProteinID:
XP_056849238
UniProt:
A0A9W3CCT4
LinkDB
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Position
8:complement(7296065..7297719)
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AA seq
385 aa
AA seq
DB search
MELKSIKDAFDRVANKQKLSYTKTQEIIQMLSQELDKALILLQEQFDQRPILASLKKTLQ
ENSPLTQIEVREKELNMALTKYPKVLEKQQLNSDISKAYRHNVEFDTHVVNQIIANFFYR
QGMFDVGDCFLAETGDESECSTRRSFVEMHQIVEAMEMRRELGPALNWATSNSEKLRQAR
SDLEMKLHSLRFLEIARDQTSQEAINYARKHMAGFADSSLYEIQKLICSLLWSRNLEHSP
YSDLLAPSRWNDAVRELTRQYCNLLDESSESALSTTLAAGTQALPVLLKYMNVMVAANKK
LDWQSVEQLPVAVELSEEFQFRSVFVCPVSKEQASDENPPMMMSCGHVLCKQTINKMSKN
GARSSFKCPYCPTDVDISKCRQLHF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaagagcattaaggatgcgtttgatcgcgttgcgaacaagcagaaactctca
tacaccaaaacacaagagatcattcagatgctttctcaagaactcgacaaggcgttgatc
ttattacaggaacagttcgaccaacgacccatccttgcttctctgaagaaaactttacaa
gagaactctccactcactcaaatcgaagttagggagaaagaactcaacatggctctcaca
aagtaccctaaagtcctcgagaagcagcagctcaactccgacatatcaaaggcttacaga
cacaacgtcgagttcgacacccatgtcgtgaaccagataatagccaacttcttctaccgt
caagggatgttcgacgtcggcgactgtttcctcgccgagaccggcgacgaatccgagtgt
tccacgagacgttctttcgtcgaaatgcaccaaattgtggaagctatggagatgaggaga
gagcttggaccagctctcaactgggcgacctcgaactctgagaagctaaggcaagcacgg
tccgatttagagatgaagcttcacagcttacgcttcctggagatagccagagaccaaacc
tcacaagaagcgatcaactacgcgagaaaacacatggcgggattcgcagatagctccctt
tacgagatccagaagctcatttgctctctcttatggagcagaaacctcgaacactctccc
tactcggatctcctcgctccttctcgatggaacgatgcggtgagagagttgacgagacag
tactgcaacctcctcgacgaatcatctgaaagcgcgttgagtacaacgctagctgcgggg
acgcaggctttgcctgtgctgttgaagtacatgaacgtgatggtggcggcgaacaagaag
ctcgattggcagagcgtggagcagcttcctgtggctgttgagctgtctgaggagtttcag
ttccgctcggtgtttgtgtgtcctgtctccaaggaacaggcgagcgatgagaatcctccg
atgatgatgtcttgtggtcacgtgctgtgtaagcagactattaacaagatgtcgaagaat
ggtgctaggtcttctttcaagtgtccttattgtcccaccgatgttgacatctcaaagtgt
aggcagttgcatttctaa
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