Raphanus sativus (radish): 130499518
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Entry
130499518 CDS
T06014
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
130499518
Transcription machinery [BR:
rsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
130499518
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Response_reg_2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
130499518
NCBI-ProteinID:
XP_056849637
UniProt:
A0A9W3CDP0
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Position
9:30273098..30276267
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AA seq
514 aa
AA seq
DB search
MGVVFISSSAARSPLGLSTDLLTHRSSLKKLPSIVAFKADDSTSNSSLIVPPEQVLEKQK
EKRVVVTRRKPKAPNQNLAPSCPLGVDYNEAAARLESIYKLSPPATTLEEDGIDGGGSKG
KVSRRRKRKESGGGVEEKKVVVIRSNGGKKEKRLDLDKRIALKRNVQEKQVIVSAHKKVT
KRQQEEEEKMKRLVRDYSASNDVVSLDWKKMKIPPVLSSSEHVWLFKLMQPMKALLQVKD
ELQQSLGREPREAEIAGEINMSVAEVKMKIKVGKAARNKLIKHNLRLVLFVMNKYFQDFT
NGPKFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLE
SVRVEIYKAKMELLFELGRLPTEEEVVERLKISPERYREVLRAANPVYSLNSKHSVTQEE
FINGITDVDGVGADDRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG
NLNISREMVRKHEVKALMKLKHQARVDYLRQYII
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtttatttcgagttccgctgcaagatctcctctagggttaagcactgat
ctcttgacgcatcggtcttcactcaaaaagctgccgtccattgttgctttcaaagctgat
gattccacgagcaactcatctttgatcgttcctcctgaacaagttttggagaagcaaaag
gagaagagagtagtagtaactaggaggaagccgaaggcaccgaatcaaaacttggctcct
tcgtgtccgttaggagtggattacaacgaagctgctgctagactagaaagcatttacaaa
ctcagccctcctgcaacaacactggaggaggatggtatcgacggcggcggctccaaaggg
aaagtttcacggaggaggaagaggaaagagagtggtggtggtgttgaagagaagaaagta
gttgtgatcaggagtaatggggggaagaaggaaaagagactggatcttgataaacggatc
gcgttgaagagaaacgttcaggagaaacaagttatcgtttctgctcataagaaagtaaca
aagaggcagcaagaggaagaggagaagatgaagaggcttgtgagagactactctgcttct
aatgatgtagtcagcttggactggaagaaaatgaagatacctcctgttctttcttcttct
gaacatgtttggttgtttaagttgatgcaacctatgaaggctcttcttcaagtgaaagat
gaattgcaacagagcttgggaagagagcctagggaagctgaaatagctggagagatcaat
atgagtgtggctgaagtgaaaatgaaaatcaaagttggtaaagctgcaaggaacaaactt
attaagcacaatctccgccttgttttgtttgttatgaacaaatactttcaagatttcacc
aacggaccgaagttccaggacctctgtcaagccggtatgagagggcttatcacagcaata
gaccggtttgaaccgaaaaggaagtttcgtctttccacttatggtttgttttggattaga
catgccatcatacggtctatgacaacctcaaactttactcgtgtcccatttggacttgaa
tcggttagagttgagatctataaagcaaagatggagctattgtttgagctaggaagactc
cctacagaggaagaggtagttgagagactcaagatatcacctgagagataccgtgaagtc
ttgagagccgctaatccggtttactcgctgaactcaaaacattcggttactcaagaagag
ttcatcaatggaatcacagatgttgatggtgtaggagctgatgacaggagacaacctgct
cttctcaggctcgctctcgacgacgtgctggattcgttgaagcctaaagagagtcttgtt
attcgacaaagatacggtcttgatgggaaaggagacaggacactaggagagatagctggt
aatctcaacatctctagagaaatggtgaggaaacatgaagtcaaagccttgatgaagctc
aagcatcaggctcgtgttgattaccttcgtcaatacatcatctga
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