KEGG   Raphanus sativus (radish): 130499537
Entry
130499537         CDS       T06014                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03030  DNA replication
rsz03410  Base excision repair
rsz03420  Nucleotide excision repair
rsz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130499537
   03410 Base excision repair
    130499537
   03420 Nucleotide excision repair
    130499537
   03430 Mismatch repair
    130499537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsz03032]
    130499537
   03036 Chromosome and associated proteins [BR:rsz03036]
    130499537
   03400 DNA repair and recombination proteins [BR:rsz03400]
    130499537
DNA replication proteins [BR:rsz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130499537
  DNA Replication Termination Factors
   ELG1-RFC complex
    130499537
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130499537
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130499537
  Check point factors
   HRAD17(Rad24)-RFC complex
    130499537
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Mg_chelatase AAA_16 Rad17 Viral_helicase1 RCF1-5-like_lid AAA_5 AAA_24 RuvB_N AAA_11 nSTAND3 AAA_assoc_2 AAA_19 AAA_25 AAA_28 DNAX_ATPase_lid MeaB AAA_30 ABC_tran AAA_18 bpMoxR RNA_helicase IstB_IS21 DUF3846 AAA_7 KTI12 cobW NTPase_1 DO-GTPase1 AAA_3 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 130499537
NCBI-ProteinID: XP_056849671
UniProt: A0A6J0KZ86
LinkDB
Position
9:26896839..26898635
AA seq 333 aa
MASSSSNSSGGGYEIPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTG
KTTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
EADSMTSGAQQALRRTIEIYSNSTRFALACNTSGKIIEPIQSRCALVRFSRLSDQDILGR
LMVVVQAENVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPL
HVKNMVRNVLESKFDDACHGMKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG
FAHMRICDGVGSYLQLCGLLAKLAVVRETAKAA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcgtcatcgtcttcgaacagttcgggaggcggttacgagatcccgtgggtggagaaa
tacaggccgagcaaggtggtggatatcgtcgggaacgaagatgctgtctcgaggcttcaa
gtcatcgctcgcgacggaaacatgcccaatcttatcctcgccggacctcctggaacgggt
aaaaccactagcattttggctcttgctcacgagcttctcggccctaattatagagaggct
gttctcgagttgaatgcttctgatgataggggtatcgatgttgttaggaacaagattaag
atgtttgctcagaagaaagtcacacttcctcctggccgtcataaggttgtcattcttgat
gaagctgacagcatgacatctggagcacagcaagccttgaggagaacgattgagatctac
tcaaactctacccgctttgcacttgcttgtaacacctccggcaagattattgagcctatc
cagagtagatgcgctttagttcgattctctaggttatctgatcaggacatacttggccgt
ctcatggtcgtcgttcaagctgagaatgttccttatgtacctgaaggccttgaggcgata
atcttcacagctgatggtgatatgaggcaagcgctgaacaacttgcaagccacattcagt
gggttccgctttgtcaatcaagaaaacgtcttcaaggtctgtgaccagcctcacccgctt
catgtcaagaacatggttcgaaatgtgttggaaagtaagttcgacgatgcttgtcacggc
atgaagcagctatacgatctaggctactctcccaccgacattatcacaacgcttttccgt
ataataaagaattatgatatggctgagtatctgaaactggagttcatgaaggaaactggg
tttgctcatatgagaatctgtgatggagttggatcatacctccagctatgtggtcttctt
gctaagttggccgttgttcgtgaaacagcgaaagcagcttag

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