KEGG   Raphanus sativus (radish): 130500269
Entry
130500269         CDS       T06014                                 
Name
(RefSeq) glutamate--tRNA ligase, cytoplasmic-like
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00860  Porphyrin metabolism
rsz00970  Aminoacyl-tRNA biosynthesis
rsz01100  Metabolic pathways
rsz01110  Biosynthesis of secondary metabolites
rsz01240  Biosynthesis of cofactors
Module
rsz_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    130500269
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    130500269
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rsz01007]
    130500269
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    130500269
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rsz02048]
    130500269
Enzymes [BR:rsz01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     130500269
Amino acid related enzymes [BR:rsz01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   130500269
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    130500269
 Prokaryotic type
   Other AARSs
    130500269
Prokaryotic defense system [BR:rsz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    130500269
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 Arc1p_N_like GST_C GST_C_3 GST_C_2 GST_C_6 tRNA-synt_1e GST_N_2
Other DBs
NCBI-GeneID: 130500269
NCBI-ProteinID: XP_056851059
UniProt: A0A9W3CHR6
LinkDB
Position
9:complement(30826423..30828925)
AA seq 722 aa
MERIKLSFPADTPPLSVIAALHISSSPVTIDSSSAATTVPTLVFSDGRKLSGTPVLLRYV
ARSAPSLLPDFYGRDAFESSQIDEWLDYASVFSSGSEFENACSRVDNYLQSSTFLVGYSL
TIADVAVWSALSGSGPRWESLRKSKKYQNLVRWFNSISLEYAEPLSKVAAYTVKKVSGKP
VATASSKQADANNNDKGGKPEVDLPGAVMGKVRLRFAPEPSGYLHIGHAKAALLNKYFAE
RYRGEVIVRFDDTNPAKESNEFVDNLVKDIGTLGIKYERVTYTSDYFSELMSMAEKLMRE
GKAYVDDTPREQMQKERMDGIDSKCRSHSVEENLNLWKEMIEGSVRGLQCCVRGKLDMQD
PNKAMRDPVYYRCNPMPHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQY
YKVLEDMGLRRVEIYEFSRLNLVYTLLSKRKLLWFVQQGLVGGWDDPRFPTVQGIVRRGL
KIEALIQFILEQGASKNLNLMEWDKLWSINKKIIDPVCPRHTAVVEERSVLLTLSDGPDE
PFVRLIPKHKKFEGAGEKATTFTKRIWLEGADASVISVGEEVTLMDWGNAIVKEVTKDEE
GRVTALSGVLNLQGSVKTTKLKLTWLPEINELVKLTLTDFDYLITKKKLEEDDEVATFVN
PYTKKETLALGDSNMRSLKSGDVIQLERKGYYRCDVPFVKPSKPIVLFSIPDGRQHQPLT
AK
NT seq 2169 nt   +upstreamnt  +downstreamnt
atggaaaggatcaaactttctttcccagcggacactccaccactttcagtcatcgctgct
ctccatatctcatcctctccggtgaccattgactcctcctccgccgcaaccaccgtccct
actctcgtattctccgacgggaggaaactgagtgggactcccgttcttctccgctacgtt
gctcgatcagctccctcgcttcttcctgacttctacggccgcgatgcctttgaatcttct
cagattgatgagtggttagattacgcttctgtcttctcctctggctcagagttcgagaat
gcttgctctcgcgttgataactaccttcagagttccacctttcttgtcggctactctctt
accattgccgatgttgccgtttggtctgctctttctggatccggtccaagatgggagagt
ttgaggaaatccaaaaagtatcagaacctcgttagatggttcaactcgatatcgctcgaa
tacgccgagcctctcagcaaggtagcagcgtataccgtgaagaaagtctcagggaagcct
gttgctactgcatcatcaaaacaagcagatgctaataataatgataaaggaggtaaacct
gaagtggacttgcctggtgcagtaatgggaaaggtcaggctccggttcgctcccgaaccg
agcggttatctccacatcggacacgcgaaagcagccttgctgaacaagtacttcgccgag
aggtaccgaggggaagtgatcgtgcgtttcgacgacactaaccctgctaaagagagcaac
gagttcgtcgacaacctcgtcaaggatatcggtaccttggggatcaagtatgagagagtg
acctacacttctgattatttctctgaactcatgagcatggcggagaagctgatgcgtgag
gggaaggcttacgtggacgacacgccgagggagcagatgcagaaagagaggatggatggg
attgattccaagtgtaggagccatagcgttgaggagaatctcaacctatggaaggagatg
attgaaggaagtgtgagaggcttgcagtgctgcgtccgtggcaagttagacatgcaagat
cctaacaaagctatgcgtgaccctgtttactacagatgcaaccctatgccacatcaccgt
attgggaacaagtataagatatatccaacgtatgactttgcttgcccgtttgttgattct
atcgaaggtataacgcatgctcttaggtctagtgagtatcacgaccggaatgctcagtac
tataaggttctggaggacatggggttgaggagggttgagatttatgagttcagtaggttg
aatcttgtttacactcttttgagtaagaggaagcttctctggtttgttcagcagggtttg
gtcggaggttgggatgatccacgcttccctacggtccaaggcattgtccgtagaggtttg
aagatagaggctctgattcagttcattctcgagcagggtgcttccaagaatctgaacttg
atggagtgggacaagctctggtctattaacaagaagataatcgatcctgtgtgtcctaga
catacggctgtggttgaagagaggagtgtgctgttgacgttgagtgatggtcctgatgag
ccgtttgttcgtttgataccgaagcacaagaagtttgaaggtgctggagagaaggctacc
acgttcaccaagaggatatggttggaaggagctgatgcgagtgttatctctgttggtgag
gaagtgactctgatggattggggaaatgctattgtgaaagaggttactaaagacgaggag
ggtcgtgtcactgcgttatctggcgtcttgaatctccaaggatctgtgaagactacaaag
ctgaagctcacttggctgcctgagattaatgagttggtcaagcttacattaacagatttt
gattacttaatcaccaagaagaagctggaggaagatgatgaggttgctacatttgtgaat
ccttacacgaagaaggaaacattagcacttggtgattcgaatatgaggagtctgaagagt
ggagatgtgattcagcttgagaggaaaggctattacagatgtgatgttccttttgtgaaa
ccatccaagcccattgtcttattctcaattccagatggaaggcaacaccaaccattaacg
gctaagtga

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