Raphanus sativus (radish): 130500272
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Entry
130500272 CDS
T06014
Name
(RefSeq) 4-substituted benzoates-glutamate ligase GH3.12-like isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130500272
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
130500272
NCBI-ProteinID:
XP_056851068
UniProt:
A0A9W3CIF0
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Position
9:complement(28475839..28481642)
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AA seq
580 aa
AA seq
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MSMWSDLSDKLDEKVLEDLTSNVKQIQDDVLREILTLNANTECLRPFLNGSSDKDAFKKN
VPVTTYDDVKLFIDRVANGEPFDVISGTPITGFSLSSGTSGGIRKRFPCTKKYLENLNFI
YRYRSLVISKHFDGLEHGKGMVFNFCVPELTTPSGLPVSAATTLFFKSDYFKNRPSYWNW
SFTSPDEVILCSDNKQSMYCHLLCGIVQRDEVVKVGTAFVSTLLRVITFLEKHWKEICTN
IRYGRLSEWITDVSCRDSVSKILGEPNPELADLIENECDQKSWEGIIQRLWPKTKFIESI
ATGQMAQHIPTLEFYSNKLPLISSSYVSSETMFGINMNPLCKPQDVSYTFMPHFSYFEFL
LVDADEEVEIVDLVDVKLGCHYEPLVTNHSGIRRYKMGDIVQVTGFYNSAPEFRFARRGN
LVLSVHMETTTDQDLLNAVTHAKMVLESSNLMLLDFTSYADISTTPGHYVLYWELKGKYN
NDIAEIDNKVLVECCYVVEESLENFYKEYRRNGWIGALEIRVVYPGTFDSLMEFFISQGA
SSTQYKTPICIKSTEAIAILEEKVHARFFTEKSLSLKFSS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtggtctgatctcagcgacaaattagacgagaaggttttggaagacttgacg
tctaatgtgaagcaaatacaagacgatgtattaagggagatactcacacttaatgctaac
actgagtgtcttaggccttttctcaatgggagttctgataaagatgcttttaaaaagaat
gttcccgtgacgacctacgacgatgtgaagcttttcatcgatcgtgtcgcaaatggagag
ccctttgatgtaatttcaggcacacctattaccggattctcactaagttccggaacttcc
ggaggaatacggaagaggtttccatgtaccaagaaatacttggaaaacttgaacttcatc
tatcgttaccgctcactcgttataagcaaacattttgatggtcttgagcatggaaaggga
atggtgtttaacttctgtgttccagagcttacaactccctctgggttgccagtttcagct
gccacgacgctcttcttcaagagtgattacttcaagaaccgaccatcatattggaattgg
tcattcacaagtcctgatgaagtcatattgtgttcagacaacaaacagagtatgtattgt
catcttctctgtggaatagttcaaagagacgaggttgtgaaggttggtacagcctttgtt
tctacattgctccgtgtaattacttttcttgaaaaacattggaaagaaatttgcactaat
attcgttatggtcgccttagcgagtggatcactgatgtaagttgtagggactccgtttca
aagatccttggagaacctaatcctgaattggctgatctcatagaaaatgaatgcgaccaa
aagtcatgggaaggtataattcaaagactttggcctaaaaccaaattcattgaaagcatt
gcaactggtcaaatggctcaacacatcccaacgttagagttttactctaacaagctacct
ttgatttcgtcgagttatgtttcttcggaaacgatgtttgggattaatatgaatcctcta
tgcaaaccacaagatgtgtcatacacgtttatgccccacttctcatatttcgagtttcta
cttgttgatgctgatgaagaagtcgaaattgttgatcttgtggatgtcaaactagggtgc
cattacgagcctttggtcacaaatcactccggcatacgccgatataagatgggtgatatt
gtacaagtgactggattttacaatagtgcaccagagtttagatttgcccgtagaggaaat
ttggttctaagtgttcatatggagacaactacggatcaagatcttttaaatgcggtgaca
catgcaaagatggttcttgaatcgtcaaatttgatgttgttggacttcacaagctatgct
gatatttctactactccaggtcattatgttctttactgggaactcaaaggaaaatataac
aatgacattgctgaaattgataacaaggttttagtagaatgttgttacgtggtggaggaa
tccctggagaatttttacaaagaatataggagaaacggatggattggagctctagagata
agagtggtgtacccaggaacttttgattctctcatggagtttttcatcagtcaaggtgct
tcttcaactcaatacaagacacccatttgcatcaaatctacagaggccatagcaatctta
gaagaaaaggttcatgctcgattctttaccgaaaagtccctttctttgaagttttcatct
taa
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