Raphanus sativus (radish): 130500342
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Entry
130500342 CDS
T06014
Name
(RefSeq) protein SEMI-ROLLED LEAF 2-like
KO
K21842
protein EFR3
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130500342
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
130500342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EFR3_ARM
EFR3
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
130500342
NCBI-ProteinID:
XP_056851276
UniProt:
A0A9W3CIE3
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All DBs
Position
9:30892686..30897947
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AA seq
983 aa
AA seq
DB search
MGFISRNVFPACESMCVCCPALRPRSRHPAKRYKKLLGEIFPKSPDGAPNERKIVKLCEY
AAKNPIRIPKIAKILEERCYKDLRSEQMKFINIVTEAYNKMLCHCKDQMAYFAASLLNVV
TELLENSKQDTPTILGCQTLTRFIYSQVDGTYTHSIEKFAHKVCSLAREQGEEHQKQCLR
ASGLQCLSAMVWFMGEFSQIFASFDEIVHAVLDNYEANMIAQTNEDREEQNCNWVNEVIR
CEGRGAGVSGCNSPSYMIVRPRTARKDPTLLTKEESEMPKVWAQICLQRMVDLAKESTTL
RCILDPMFSYFNSRRQWTPPNGLAMIVLSDATYMMETSGSQQLVLSTVVRHLDNKHVVSD
PELKAYIIQVAGCLAKLIRTSSYLRDISFVNDLCRHLRKSFQATSRSVGEEELNLNVMLQ
NSIEDCLREIAKGIGNTQPLFDMMAVLVEGLPSSGVVSRAAVGSLLILAHAMSSALSPSM
RSQQVFPDALLDALLKAMLHPNVETRVGAHEIFSVILLPSSGQSQAGLASVRASGYLNES
RNLRSDTTTSAFTSIAARLDKLRKEKDGVKIEKNGYNEDLKNYKSSPNFHKLNSMIDRTA
GSVSLADMLPSMMKFTEDQIGQLLSAFWTQSTLSDNVPSNIEAIAHSLSLVLLSLRLKNP
DDGLVVRAFQLLFSLRNLSLDLNNGTLPTVCKRLILALSTSTLMFAAKIYQIPHICKILK
SQLPGDVDPYLFIGDDLQLHLKPQANMKDFGSSSDSQMATSMLFEMRSKVELSNTIITDV
VAKNLSKASKFQEADVQMQLSEPFTPDDAFMFGSRLISEPGPNQSISKESLSFDEDIPAG
TMVEDEVTSELSVRFQPRGSPSSSTPQVLSIGQLMESALEVAGQVVVSSVSTSPLPYDTM
TNRCETFGTGTRQRLSRWLATENRQVNGLYRNSSEESSALEKVTEDGSIYGRECGVFQDT
WSMMSLPPASPFDNFLKAAGAGR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggggttcatctcaaggaatgtttttccagcgtgcgagagtatgtgcgtttgctgccct
gctctcaggccgagatctcgacatcccgctaagcgttacaagaaactgctcggcgagatc
ttccctaaatcccctgatggtgcaccaaatgagagaaagattgtcaaattgtgtgaatat
gctgccaaaaacccaatccgtatccctaagatagctaagattcttgaagagaggtgttac
aaggaccttcgatctgaacagatgaagttcatcaatattgtcactgaggcttacaacaaa
atgctttgccattgcaaagatcagatggcttatttcgctgcaagtttgctgaatgtggtt
acagagctacttgagaattcaaagcaggacacaccaaccattcttggatgccaaactttg
acaaggttcatttacagtcaggttgatggaacttacacacacagcattgaaaaatttgcg
cataaagtttgctcattggctcgtgaacaaggtgaagaacatcaaaagcagtgtctgaga
gcatctggcctccaatgcctctcagctatggtgtggtttatgggagagttttcacaaatc
tttgcttcttttgatgagattgtacacgccgttcttgataactacgaggcaaacatgatc
gctcagaccaacgaagacagagaagagcagaactgcaactgggtgaatgaagtgatcaga
tgtgaaggccgaggagcaggagtcagcggttgtaatagccctagctacatgattgtcaga
ccaagaactgcaagaaaagatccgactctattgactaaagaagagagtgagatgcctaaa
gtgtgggcacagatttgtctccagaggatggttgatctggctaaagaaagcacaactctg
cggtgtatcttggatcctatgttcagctatttcaactctagacgccaatggactcctcca
aacggtctggccatgatagttctctctgatgcaacatatatgatggaaacctctgggagt
cagcagctggtgttatcaactgttgtacgtcatcttgacaataagcatgttgtcagtgat
cctgaactcaaggcatatatcatacaagttgctggttgtctagcaaagctgatccggacc
agttcgtacctcagggacataagttttgttaatgacttgtgccggcatctgaggaaaagc
ttccaggcaacgtcgagatcagttggagaagaggaactcaacttgaacgtgatgcttcag
aactctattgaagattgtctgcgagagatagccaaaggaattggaaacacacagccattg
ttcgatatgatggctgttttagtcgaggggcttccttcttcaggagttgtttcacgtgca
gcggttggatcactgttgattctcgcacacgcaatgtcttcagcgttgtccccatctatg
cgttcgcaacaggttttcccagacgcacttcttgatgcgcttcttaaagcaatgctgcat
ccaaatgtggaaactcgtgtgggagcgcatgagatattctctgtgattctcttgccgagt
tctggtcagtctcaggctggacttgcatcagtgagagcttctggttatctcaacgagtcc
aggaacttgagaagcgatacaacaacctctgcgttcacatctatcgctgctagattagac
aagctcagaaaggagaaggacggcgtcaagattgagaagaacggttataatgaggatctt
aagaactacaaatcttccccaaactttcacaagttgaattccatgattgataggactgct
gggagtgtcagtctagctgatatgttaccatcaatgatgaagtttactgaagatcaaata
gggcaattgttatctgcgttttggacacagtcaactctttctgataatgtaccttcaaac
attgaagctattgctcattctttgagtttggtgcttctttccttgcgactaaagaaccct
gatgatgggcttgttgtccgtgccttccagcttcttttctcactgaggaatctttctttg
gaccttaataacgggacattgccaacggtttgcaagcggttgatccttgctttatccacg
agtacgctgatgttcgctgccaaaatatatcagattcctcatatttgcaaaatcttgaag
agtcaacttcctggtgatgtggatccgtatctgttcattggcgatgacttgcaacttcac
ttaaaaccacaggcgaatatgaaagactttgggtcatcaagtgatagccagatggctact
tcaatgctgtttgagatgagaagcaaagtagaactctccaacactatcataaccgatgtt
gtggctaaaaatctatctaaggcttcaaagttccaagaagctgatgtacagatgcaactc
tctgagccgttcacacctgatgatgcttttatgtttggatcacggcttatctctgagcct
ggaccaaaccaaagtatctctaaggaatcgctgtcctttgatgaggacatacctgcaggt
acaatggttgaggacgaagtgacgagtgaactctctgtacgttttcaaccaagagggtcc
ccttcatcatctactcctcaagttctcagcattggccagcttatggaatctgcgcttgag
gtggctggtcaagtagttgtgtcatctgtctccacttctccgcttccttacgacacaatg
acaaaccgctgcgaaacctttgggactgggacaagacagaggctctcaaggtggttggcc
accgagaaccgccaagtgaatggtctctacagaaactcatcagaggagtcttctgcactt
gaaaaggtaacagaagatgggagcatctatgggagagaatgtggtgtgtttcaggatacg
tggtccatgatgagtctgcctccagctagtccctttgacaatttcctcaaagcagcagga
gctggaagatga
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