Raphanus sativus (radish): 130500377
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Entry
130500377 CDS
T06014
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
130500377
03036 Chromosome and associated proteins [BR:
rsz03036
]
130500377
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130500377
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Helicases
130500377
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130500377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
Motif
Other DBs
NCBI-GeneID:
130500377
NCBI-ProteinID:
XP_056851353
UniProt:
A0A9W3CIC8
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All DBs
Position
9:29609191..29612509
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AA seq
656 aa
AA seq
DB search
MPSLALSDKKKEEKKMKKKIDLETTTPEQQDSKKKGKKLKLSDSDGEESDKKEKEKKKSK
KKRKSSEVDEESEEEKKSSKKVKVDNPNAVSNFRISDPLKDKLKEKGIEALFPIQATTFD
MVLDGADLVGRARTGQGKTLAFVLPILESLINGPAKSKRKNGYGRAPSVLVLLPTRELAK
QVYADFEAYGGSVGLTSCCVYGGDPYAPQEHKLKRGVDIVVGTPGRIKDHIERRNLDLTY
LQFRVLDEADEMLRMGFVDDVELILGKVEDPKKVQTLLFSATLPGWVQNIAARFLKQDKK
TIDLVGNDKMKASNSVRHIALPCNKQAMSRLIPDIISLYSSGGSTIIFTETKDQASELSG
LLPGARALHGDIQQSQREITMAGFRKGKFSTLVATNVAARGLDINDVQLIIQCEPPRDVE
DYIHRSGRTGRAGNTGVAVMLYDSRKSGVSRIEKQAGIKFEHVSAPQPNDIARAVGMEAA
EKITQVCDSVVPAFMAAAKELLESSGVSAEVLLAKALAKTAGFTEIKKRSLLTSMENHVT
LLFEAGKPIYTPSFVCGVLKRILPDDRANSIEGLTLTADGQAAVFDVAQSDVDQFIAAAR
KNASVSLEVVKELPKLQEREPAQRRFGRPGGGGQGFNNRGRGGSRFGRGGGRGQRW
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgccttcattagctttatccgacaagaagaaagaggagaagaagatgaagaagaagata
gatttggagacgacgactccagagcagcaggactcgaagaagaaagggaagaagctgaaa
ctctcagattccgatggagaagagtctgataagaaggagaaggagaagaagaagagtaag
aagaagcgcaagtcttcagaggtagacgaagaatcagaggaagagaagaagagcagcaag
aaggtgaaagtcgataaccctaacgccgtctccaacttccgtatctctgatcccttgaag
gacaagcttaaggagaagggtatcgaggctctcttcccgattcaggcgacaacgtttgac
atggttctcgatggtgctgatctggtcggaagggctcgtactggtcagggtaaaacattg
gcttttgtgttgcctatactggagtcattgatcaatgggcctgctaagagcaagaggaag
aatggttacggcagggcaccaagtgttttggttcttttaccaaccagagaattggccaag
caggtgtatgctgactttgaagcatacggaggatccgttgggttaacttcttgctgtgtc
tatggaggtgatccttacgcacctcaagagcataaactaaagagaggtgttgacattgtt
gttggaacacctggtcgtatcaaggatcatatcgaaaggagaaaccttgacctgacttat
ctacagttccgtgttcttgatgaagctgatgagatgctgagaatgggattcgttgatgat
gttgaacttatcttagggaaggttgaggatcccaagaaagtccagacgcttctcttcagt
gccaccttgccaggatgggttcaaaacattgctgctaggtttcttaaacaagataagaag
actattgatcttgttggtaatgataagatgaaggcttctaatagtgttagacacattgct
cttccctgtaataagcaagccatgtctcgtttgattcctgatatcatcagcttatacagc
agtgggggtagtactatcattttcactgagactaaagaccaagcctctgagctttctggt
ctcttgcctggtgctagagctttgcatggtgacattcaacaatcacaacgtgagattact
atggctggatttagaaagggaaagttctctacattggttgctacaaacgtcgccgctcgt
ggtctagatatcaatgacgtgcagctaatcatccagtgtgagcctccacgtgatgttgaa
gactacatccaccgttcaggcagaacaggaagagctggcaacactggagttgcggtcatg
ctgtacgactctagaaaatccggcgtgtccaggatcgaaaagcaagccggaatcaaattc
gagcacgtttctgcgccgcagcctaatgatatcgccagagctgttggcatggaagcagcc
gagaagatcacgcaggtctgtgacagtgtggttcctgcttttatggctgctgccaaagag
ctcttggaaagctccggtgtatcagcagaagtcctcctcgctaaagcacttgcaaaaacc
gcgggtttcactgagataaagaaaaggtcgcttttaacatcgatggagaatcatgtcacg
ttgctttttgaagcagggaaacctatttacactccatcatttgtatgtggtgtactgaag
agaatcttaccggatgacagggctaattcgatcgaagggttgactctaacagcagatgga
caagctgctgtgttcgatgttgcgcagtcggatgtagaccagttcattgcagctgcgcgg
aagaatgcgagtgtgagcttggaggttgtcaaggagttgcctaagcttcaagagagggag
cctgcgcagagaagatttggccgcccgggtggtggtggccaagggtttaataatcgtggc
agaggaggtagtagatttggtcgtggtggtggtcgtggccagagatggtga
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