KEGG   Raphanus sativus (radish): 130500635
Entry
130500635         CDS       T06014                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130500635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    130500635
   03400 DNA repair and recombination proteins [BR:rsz03400]
    130500635
Spliceosome [BR:rsz03041]
 Complex B
  Other components
   Prp19 complex
    130500635
 Complex C
   Prp19-CDC5 complex
    130500635
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    130500635
SSDB
Motif
Pfam: BCAS2 ORC3_ins Crescentin FapA FUSC
Other DBs
NCBI-GeneID: 130500635
NCBI-ProteinID: XP_056851540
UniProt: A0A9W3CJ02
LinkDB
Position
Unknown
AA seq 250 aa
MATNNGDVLMLEAAPEATKPWASAANAEVIDALPYIDDDYGNPLIKAEVDRLVEEEMRRS
SRKPADFLKELPPLPKFDFENCPVLGKEYERVRAGKPPVRIDFESRYKLELPPASKKNDD
AAWKQYLQKNQRSLQQKMIELENLEMMSKQGPELWRQNNHRLEVFLTRMQKLAQEQNEEI
EKVNRERKYHQQTTAYELNALSQEWRQLCMKNMEIQSACAVLETQIDSFKREAAERGWNL
EEKLESVKPL
NT seq 753 nt   +upstreamnt  +downstreamnt
atggcgacgaacaatggagacgttttgatgctagaggcggcgccggaggctacgaagccc
tgggcgagcgctgcgaacgcagaagtcatcgacgcgcttccttatatcgacgatgactac
ggcaacccactcatcaaggcggaggtcgatcgccttgttgaggaagagatgcgtcggagc
tcgagaaagcctgccgactttctcaaggagttgcctcctcttcccaagttcgatttcgag
aactgtcctgtccttggcaaagagtatgagcgtgttcgagctgggaagcctccagtgcgg
atcgattttgagtcccggtacaagcttgaactgccgcctgctagtaagaaaaatgatgat
gctgcctggaagcagtatcttcagaagaatcaacggtcattgcaacagaagatgatcgag
cttgagaatttggaaatgatgtcaaaacagggccctgagctttggagacagaacaaccat
cggctagaagtattcttgaccagaatgcaaaagctagctcaggagcagaacgaagaaatt
gaaaaagtaaatcgtgaaaggaagtatcatcagcaaaccactgcgtacgagctcaatgca
ctatctcaagaatggagacagctgtgcatgaagaatatggagattcagtctgcttgtgct
gtgctagagacacagatcgattcgttcaaaagggaagctgctgaaagaggatggaactta
gaagagaaactagagagtgtcaagccgctttaa

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