Raphanus sativus (radish): 130500734
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Entry
130500734 CDS
T06014
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1-like
KO
K28108
shortage in chiasmata 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
130500734
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Meiosis-specific proteins
Others
130500734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130500734
NCBI-ProteinID:
XP_056851679
UniProt:
A0A9W3CJL3
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MRGRFLNIDYFSTRPSQVYEALGFLNLPAPDDFPAPLFREDTREEFLRFEPIEGFSLPIE
DLPIGDALSRFLSDVVPDRVSVDYGAFEMDCSSLGDELRFVLGRGDPRFLEKSEGDAVEE
KATLDLNIVQLETPELDFEMENKLSSMIEDLQCLSKVLEIRNEPVKFEESDVVLKNSSDI
KQKIYSVDCVSSDYFTEKSTSVKEDECFRKNRPWFRDAVFPLLEVDEVNLNELSSLSMLD
KVFAVLETIEPRDMDTESSLGLNSKELIGSKGYDILDILSTDCYSNKSVQSDVVPQEIDI
VTILEIPNPVESFQFGQGKLAVDVVSVSFEEVQILDVEMYDVFGSFLCLQQATEPEICPG
MFSEEMNFKNFDELVVSSELAFADDAFKSLPIPILHDYEMTRSLELIYENYLSKIKPQAF
PASNDIYLPLNLLEETKHSHEAHFCDYLSEEIVTCSIDYDLESLEGDKWVYDFVLSEDAF
CKPLVERCTEPFYGISTLDEHPPVNISHGLLEHPCPETGAGDCGRNDHAKKAALLFKSMS
AFDDLSFFMDPQKAVIEENLESRVEAAKTVNHKITSTVSKASCISGAMHPSSKTEDMKVH
SVRPSENILALVRDFEKSYLTLVKDDEDLISTLSEDKLKLLSISKGKLIDCIRKANVHKT
WSADDKTFTFALLLAIKQMTWYLCFFGIRVAYLYLNKLCRSSNPMKLGLHTLYSSFESEH
MSTERDITRSHPSLSVIKGILQSKCVRGNSKALLLAEKVFWSSLKSLLVSMGLSYNELNS
PSPSGNQPTLNEATELCFLPTTDCLLVAYERISPSFPVENFNVIVEYGGPNASPRVSSPL
KLDSFPCFHFIKVQLDMSSACGQLSAGVTVPYSFKMVKGDEYETKTGWLEEVLNFVPLES
LCSAESSESTKESKSDFVPQESGRKIGINEQGVLSDQIAVIVVNTKIVDKEMIISRRSTY
QKVLAMEKEGVQVVERDSDLPVDLMLSPAICLVWYDCGSVSKKSDATIGASSSSLSWIGD
IATNVLTSLSFGFSTCVMVFEGEPTCLATVMDSSDELYAAAGSLGINLQIFCSSSAELTD
AIILRCIKSSVKSSQVHAKMPESESLAESFLTKFPSVNPLTAHVILSSTGSLLEFMKLPH
TSKVQMLQKYHVPEESVELFSSLSRYGAREDSKSVMTESSSSVSSGQDSDAHHFSVHSGS
KRKQYITGKDETNMDDFVHCVPSTEFAGTKRKPSGDFQLDDPWSSRDHEMFHFDPVTEFP
DAPLKPSGIIHRNDSWPSKDPERFDKNSGPGSSSKDTFRENDFGVEENLPGFESWSLPVT
DDFMSQNRGRKLPVMGEANLHDTRNSENFMGDYKGEVINIENNKFLEVDFPPSPAYNRYS
PAVSDVAEDPRKSKSARKLSFSGSIQPIFPTSAEFNFNSERLPTESTTPSRGYVDNFPAK
RQRTLLEEVLTRRSAVSTTDHPFQEEISHFGVSPLSNAIRSPDPVQGSPWTVDFLNRVRE
RSTERKQKQSLQQSLPSYITPSSLETRGDPKKPNIKRKSPSMLEFFKHKGGNARSRVPEE
RKPKRFKNSSASPQNERFDSILRSTTPIDKRAKQTLSFAVNGSGRQTKLVWK
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggtcgatttctcaacatcgattacttctccactcgaccttctcaggtatacgaa
gccctaggcttcctcaacctcccggctcccgatgatttcccggctcctctcttccgcgag
gacacgagagaagagtttctacgattcgaacctatcgaaggcttctctctcccgatcgag
gatctgcctatcggagacgcgttatcgaggttcctctccgacgtggttcccgatcgcgtc
agcgtcgactatggagccttcgagatggattgctcctccctcggagacgagctgaggttt
gttctcggccgtggagatcctcggttcctcgagaagagtgaaggagatgccgttgaggag
aaagctacactagatttgaacattgttcagctggagactccagagttggatttcgaaatg
gagaataagctctcatccatgattgaggatctccaatgcctctctaaagttctagagatc
cgaaatgagccggttaagttcgaggagtcagatgttgttctaaagaactcaagtgacatc
aaacagaagatttattctgttgattgcgtttcttctgattactttacggagaagagtact
tcggtgaaagaagatgaatgcttccgcaagaaccgaccatggttcagagatgcggtattt
ccccttctagaagtggatgaggtaaacttgaacgaactatcgagcttgtctatgcttgat
aaagtatttgctgttcttgaaacgattgagcccagagatatggatacagagagttctctc
ggtttgaattctaaggagcttataggctctaagggttatgatatattggatatcctctct
acggattgctattcaaacaagagtgtccagtctgatgtggtaccgcaggagattgatata
gtgactatcttggaaataccaaatcctgtggaaagctttcagtttggacagggaaagctg
gctgttgatgtggtctcggtaagttttgaggaagttcagatcttggatgtggagatgtat
gatgtttttggtagcttcctttgtctgcaacaagccactgaaccagaaatatgtcccggg
atgttcagtgaagagatgaacttcaagaatttcgatgaattagttgtcagttctgaactt
gccttcgcagatgatgctttcaagtctctgccaattcctatcttacatgattatgagatg
acaagatctctggaactcatttatgagaattatttgtcaaagatcaagcctcaagccttt
cctgcatcaaatgacatatacttgccgttgaaccttcttgaggagacaaagcacagccac
gaagcccatttttgtgattatctgtctgaagaaatagttacatgcagcattgattatgat
ttggaatctttagaaggagacaaatgggtctatgatttcgtgctctctgaagatgctttc
tgcaagccactggtagagagatgcactgaacctttttatggtatatctacccttgatgaa
catcctccagtcaatatttctcatggtttattggaacacccttgtccagaaacaggagcc
ggggattgtggaagaaatgatcatgccaaaaaggctgccctgttgttcaaatcaatgtct
gcttttgatgacttaagttttttcatggatcctcagaaagctgtgattgaagagaatctt
gagtctagagtcgaagctgctaagactgtcaaccataaaattacgtccactgtctcaaag
gcttcatgtatatctggtgccatgcacccaagctcgaagacagaggatatgaaagttcac
agtgtgcgcccttcagaaaacattctggcccttgttcgggattttgagaagagctattta
actctcgtgaaggatgatgaagatttgatttcaactttatcagaagataaactgaagtta
ctcagcatttcgaaaggaaagcttatcgactgcatacgaaaggcaaatgtccacaaaaca
tggtcagcggatgataagactttcacgtttgcattgctactagcaattaaacagatgaca
tggtatttatgtttctttggtatccgtgtggcatatctctatcttaacaagctatgtcgg
agctcaaatcccatgaagctaggattgcacacgctctactcatcatttgaatcagaacac
atgtcaactgagagagacatcactagatcacatccatccctatctgtcatcaaggggatt
ttacagtcaaaatgtgtccgtgggaattccaaagcgttacttttggcggagaaagttttt
tggtcctctctgaagagtctattggtgtctatggggttatcttacaatgagctcaacagt
ccgtccccaagtggaaatcaaccgactcttaacgaagcaacagaactttgtttcctgcca
accacagactgtctacttgttgcttacgagcgcatttctccatcttttcctgtggaaaat
ttcaacgtcattgtagaatatggaggtccaaatgcatcacccagagtctcatctccttta
aagttggactcctttccttgctttcattttataaaagtgcagctggatatgtccagtgcg
tgcgggcaactctctgcaggtgttacagtaccttatagtttcaaaatggtaaagggagat
gaatatgagacgaaaactgggtggttggaagaagtgttgaactttgttccacttgaaagt
ttgtgttcagctgaatcttcagaatctacgaaggaatctaaatctgacttcgtgcctcaa
gaatctggaagaaaaattgggataaatgagcagggagttctctctgaccaaatagctgtg
attgtagtgaacacaaaaattgttgacaaggagatgataatatccagaagaagtacgtat
caaaaggtcttggcaatggaaaaagaaggagtgcaagttgtggagcgcgattccgatcta
cctgtggacctgatgctaagtcctgcgatttgtctagtctggtatgattgtggaagtgtt
agtaagaagtcggacgcaactattggtgcttcctcaagctcactttcatggattggggat
atcgcaaccaatgttttgacgtcattgagcttcggtttcagcacctgtgttatggttttt
gagggggaacccacttgcctggctacagtaatggactcttctgacgaactgtatgcagca
gctggcagcctgggaatcaatttacagatcttttgctcatcatcagctgaattaactgat
gcaattatactgaggtgtatcaaatcttctgttaaatcttcacaagtccatgccaaaatg
cccgagtcagaatctcttgcagaatcatttctcaccaagtttccttccgtgaatccactg
acagctcatgtaattttgtcatctactggatcacttctcgaattcatgaagctcccacat
actagcaaggttcaaatgttgcaaaagtaccatgtacctgaagagagtgttgaactcttc
agttcattatccagatacggtgcgagggaagactccaaatctgtaatgacagagagctct
tcttctgtatcttctggacaggactcagacgcccaccatttcagtgtccattctggttcg
aaaaggaaacagtacattactgggaaagatgagactaatatggacgactttgtccattgt
gttccctcgacagagtttgctggtacgaagcgcaagccttcaggggatttccaacttgac
gatccttggtcatctagagatcatgagatgtttcattttgaccctgtcactgaattccca
gatgcacctctcaaaccttctgggatcattcatcgtaacgactcttggccatctaaagat
cctgagaggtttgacaagaactcaggacctggttcttcatcaaaggacacgttccgggag
aatgattttggagtcgaggaaaaccttcctggatttgaaagttggagtttacccgttacc
gatgacttcatgagtcagaacagaggacgcaagcttcctgtgatgggagaagctaacttg
cacgacactagaaactcggagaacttcatgggagactacaaaggtgaagttatcaacata
gagaataataagtttctcgaggtagacttccctccttctcctgcttataacaggtactct
ccagcagtctctgatgttgctgaagatccgagaaaatcgaagtctgcaagaaagttatct
ttctctggatctatccagcccatcttcccaacatcagctgagtttaacttcaattctgaa
aggctacccaccgaatccactactccttcgcgtggctatgttgataacttcccggcaaaa
cggcaacggactcttctggaagaagtcttaacacggagatctgcagtttccacaacagat
catccatttcaagaagagatatcacattttggtgtgtctccactatcaaacgcaatccgt
tctccagatccagtacaaggttctccctggactgttgatttcctcaacagagtcagagaa
aggagtacagaaaggaagcagaaacaatctcttcaacaatctcttccttcttatatcact
ccctctagtttggaaactcgaggggacccaaagaaacctaatatcaagaggaagagtcct
tccatgctagagtttttcaagcataaaggaggcaatgctcgtagcagagttccagaagag
agaaagccgaagcggttcaagaattcttcagcctcgccacaaaacgagagatttgactcg
attcttaggtcgactacgccaattgataagcgagcaaaacagactctatctttcgctgtg
aatggatctggaaggcaaacaaaactggtctggaagtag
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integrated database retrieval system
