Raphanus sativus (radish): 130500810
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Entry
130500810 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130500810
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130500810
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130500810
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
130500810
NCBI-ProteinID:
XP_056851744
UniProt:
A0A9W3CJV0
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MRNGVPLKKMARFMTQVFVLISFLQGVYSQTSGNKSNIGKPGQNLASPPVTLKKIGLNQV
VIDNGIIQVTFSNPSGLITGIKYNGINNVLNGKIKNRGYWDVVWYEPEKESQTDFLKGEK
FDIINQTTEHVEISFSRTWTITRRGSIAPLNVDKRYIIRSGVSGVHMYAVLERLEGWPEV
EMDQTRIVFKLDTTRFDFMAISDNRQKTMPSNADRDINDGVAARLAYKEAVRLKNPQNHM
LKGQVDDKYMYSMEDKDNKVHGWISSEQRVGFWMITPSDEFRTCGPIKQDLTSHVGPTVL
SMFTSIHYVGKEINTAYASDEPWKKIFGPVFVYLNSGSSSDLLWTDAKRQMAEEVQSWPY
DFVKSVDYPLCQQRGTVKGQLFVMDSYKSKSKLNGEFAFVGLALPGQAGSWQTENKGYQF
WTRADKMGRFAIANVRPGSYSLYAWVVGFIGDYKYECDIIITPGKKINVGPIVYEPPRNG
PTLWEIGVPDRTAAEFNIPDPDPTLFTKLYLNNANPSQDRFRQYGLWNRYSVLYPRKDLV
FTTGVSDYKKDWFYAHVNRYSGKEKYQATTWKIVFNLKTVIKTGNYTLRIALASATKADL
FVRVNKANSHPIFKTGLIGQDNAIARHGIHGLYRLYSIDVQRKLLRVGDNTVFLTQNRNT
SFFTGVMYDYLRLEGPY
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacggagttccgttaaagaagatggctcggttcatgactcaagtttttgttctg
atatcttttcttcaaggtgtttactcccaaacgtcaggaaacaaatcgaatatcggtaaa
ccgggacaaaacctcgcatctcccccggttacgcttaagaaaattggccttaaccaagtt
gtcattgataatggtatcatccaagtcaccttctcgaatccatcaggcttaataaccgga
atcaaatataatggtattaacaatgtgttgaacggcaaaatcaagaaccgcgggtattgg
gatgtagtatggtatgaacccgaaaaagaatcgcaaacagattttttaaaaggagaaaaa
tttgatattataaatcaaacaactgagcatgtcgaaatttcattttcaagaacatggact
atcactcgacgtggatcgatagccccattaaacgttgataaaaggtatattattcggagt
ggtgtatccggagtacatatgtatgctgtgttagagaggttagaaggttggccggaagtg
gagatggaccaaaccagaatcgtctttaagcttgacacaacaagattcgattttatggca
atatcagataatcggcagaaaactatgccttctaatgcagatcgagatatcaacgatggc
gttgccgccagattggcttacaaagaagcggttcggttgaagaatccacaaaatcatatg
cttaaaggacaggttgacgataagtatatgtactcgatggaagacaaggacaacaaagta
catggttggatctcttctgaacaacgtgtgggcttctggatgattactcccagtgatgag
ttccgtacatgtgggcccatcaaacaagatctcacttctcatgttggacccaccgtactt
tctatgtttacaagtatacattacgtgggaaaagaaattaatacagcttatgcaagcgat
gagccgtggaagaaaatatttggtcctgtctttgtctatctcaactctggctcctctagt
gatctcctttggaccgatgctaaacgacagatggctgaggaggttcaaagctggccttat
gacttcgtgaagtcagtagactaccctctttgccaacaaagaggaacagtcaagggtcaa
ctatttgtcatggacagttacaaaagcaagtcgaagttaaacggggaatttgcttttgtg
ggtttagcattacctggtcaagctggttcatggcaaaccgaaaacaagggatatcaattt
tggacacgagcagacaaaatggggaggttcgctatagcgaatgtgagaccaggaagttat
agcctctacgcatgggtcgtcggatttatcggagactataaatacgagtgtgacattatc
atcacaccaggcaaaaagataaacgtaggacccatcgtgtacgagccgccaagaaatggt
ccgacgctgtgggaaatcggggtaccggatcggaccgcagcagaattcaatatcccagat
ccggatccaacccttttcaccaaactttatcttaataacgcaaatccttctcaagacaga
tttagacaatatggtctatggaatcgttacagtgttttgtatcctcgaaaagatcttgtt
tttactactggagtaagtgactataaaaaagattggttctatgcacatgtcaacagatat
tctggaaaagaaaaatatcaagcaacgacatggaaaattgtgtttaatttaaaaacagtg
attaaaacaggaaattacacacttcgaatagctctggcttcagccacaaaagcggatttg
tttgttcgggttaataaagccaattcccatcctattttcaagaccgggttaataggtcag
gacaacgcgatcgctaggcatggaattcatggtctgtacagattatacagtatcgatgtt
caaagaaagttgcttagggttggcgataatacagtttttcttactcaaaatcggaatact
agtttttttacaggtgttatgtatgattatcttcgtttggaaggtccatattaa
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