KEGG   Raphanus sativus (radish): 130500978
Entry
130500978         CDS       T06014                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130500978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    130500978
   03400 DNA repair and recombination proteins [BR:rsz03400]
    130500978
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    130500978
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     130500978
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 130500978
NCBI-ProteinID: XP_056851863
UniProt: A0A9W3CJT5
LinkDB
Position
Unknown
AA seq 386 aa
MRTRGASPNHLNDRSSSDESRSFFNCLEKFTSLDDLLSECTYKGGKRKTCNGFGCNLVTS
GNTVKEQPFDDESHGRQECSESLTQVRRVSPYFQGATVSEQHKQGCNSDSVSSKTQSGIS
CTRKAKVQRVSPYFQGATSSPCDSDNFASQSGRKPRKRCSKALPNVRKVSPYFQGSTVSE
QPRDLRQHFKVAKVSRYFHGLSADGIQVNESQKEISRRVRKTPLVSPSLSKRQKTDEAYL
RKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTSGAQARRVISDLFALCPNAMT
ATQVEEKEIETLITPLGLQKKRAKMIQRLSLEYLQESWTHVTQLHGVGKYAADAYAIFCN
GKWDCVKPDDHMLNYYWEFLRIRYKL
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaggactcgtggggcctcgcctaaccatttaaacgacagatccagctccgatgagagt
cgctcgttttttaattgcctggagaagtttacaagtttggatgatttgttgtctgagtgt
acttataaaggtgggaagaggaagacatgcaatgggtttggatgtaatcttgttacttca
gggaacactgtaaaggaacaaccttttgatgatgaatctcacggaaggcaagaatgtagt
gaatctctgactcaagtaagaagagtttctccgtacttccagggagcaactgtttcagaa
cagcacaaacaagggtgtaattctgatagtgtttcttctaaaactcaaagtggaataagc
tgtactaggaaagctaaagtccaaagagtttctccatacttccagggagcaactagttca
ccgtgtgattctgacaactttgcttctcaaagtggaagaaaacctaggaaaagatgcagc
aaagctctacctaatgtccgaaaagtttctccatatttccagggatcaactgtttcagaa
cagccaagagatttgcgtcaacattttaaggtcgcgaaagtttcaagatatttccatggc
ctgtctgcggatggaatccaagtaaatgaatcacaaaaggagatatcaagaagggtgagg
aaaactcctcttgtgagcccttcactctctaagcgtcagaagactgatgaggcatacctg
cggaaaacgcctgataacacatgggtgcctccacgttctccatgtaatctacttcaagaa
gatcactggcatgatccatggcgggtgttggtcatatgtatgcttctcaacaaaacttct
ggtgcccaggcgcgaagggtgatatcagacctgtttgcgctgtgtcctaatgcaatgact
gctacacaagtcgaagagaaagagatagagactctgataacacctcttggactacagaag
aagagagccaaaatgatacaacggctttctctcgagtatcttcaagagagctggactcat
gtcactcaactgcatggagttggaaagtatgcagcggatgcatatgccatattctgtaat
gggaagtgggattgcgtgaaacctgatgatcatatgctaaactattactgggaattcctc
aggattcggtataagttatga

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