Raphanus sativus (radish): 130501222
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Entry
130501222 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130501222
KO
K03267
peptide chain release factor subunit 3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130501222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130501222
03012 Translation factors [BR:
rsz03012
]
130501222
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130501222
Translation factors [BR:
rsz03012
]
Eukaryotic type
Release factors
130501222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
AAA_29
RsgA_GTPase
GTP_EFTU_D2
EF-G_D2
G-alpha
SMC_N
Mg_chelatase
ABC_tran
Rad17
AAA_33
T2SSE
AAA_23
Motif
Other DBs
NCBI-GeneID:
130501222
NCBI-ProteinID:
XP_056852089
UniProt:
A0A9W3CKT6
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MEDSKKRRLEEETDAILTKRPKADAGVHCEADVRMLDTRSHLTMLFMGPSGSGKSTIVGQ
ILLLLGLVSIEELQENEALAIADDRQGRQLAYIIDNKEDDHRLNDEMQLGNASFEIKSRT
FTVLDAPGQSRLVPKMIKGAYEADLGILVISASDGEFEQCFSSLTQEHLQLTSAFGVEKL
IVLINKMDTVLWSTARFEEIEEKLSSFLFLKNYFHSENVTFLPVSGLHGDNIEMCRSGTV
RSLFDVLEAMDLVPRGDASAPFRMPIIQVYTNEDGNHVIYGRVCSGTIKKHDYKHDNLVI
MPYQERPKVVALYCIKGKIEVDQAGPGDYVSIHIVPPHNDIHPGAVLSSGGALSRTKSFT
AELRFLKTPARMYNGFKAMLHIHSLEVHNCEIVEMKKFTNGSWSGRRRFVKEGEFALCRI
EVPEDYISIEEIANFPQLGELVLRTEGYTVAVGNVISWDQDEDVVMAGF
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggaagattctaagaagagacgtctagaagaagagactgatgcgattctcacgaagaga
cctaaggctgatgcaggtgtgcattgtgaggctgatgtgagaatgctagacacaagaagt
cacctaaccatgctcttcatggggccctctggatctggaaagtcgactattgtgggacaa
attcttctactgctcggcctagtgagcattgaagagctgcaagagaatgaagcactagca
atagctgatgatagacaaggccggcagttggcgtacataatagacaataaagaggacgac
cataggctcaatgatgagatgcagctcggaaacgcaagctttgagattaagagcagaacc
tttactgttttggatgcaccgggtcagagtcgtttggtgccaaaaatgataaaaggagca
tatgaggcagatttgggtattctggtgatttcagcctctgatggggagtttgaacaatgt
ttttcgagtctgactcaagagcatcttcaactcacaagcgcttttggagtggagaaacta
attgttctcattaacaaaatggacaccgtactgtggtctacggctagatttgaggaaata
gaagaaaagctctcctcgtttctgtttctgaaaaattactttcacagcgagaatgttacc
ttcttaccagtgtcgggactccatggagacaacattgaaatgtgtcgaagtggcactgtg
cgctctctctttgacgttctcgaggctatggatcttgttccgagaggggatgcttctgcg
ccattcagaatgcctattattcaagtctacacaaatgaggacggaaatcatgtcatttat
gggagggtctgctctggaacgataaagaagcatgattacaaacatgataaccttgttatc
atgccatatcaggaacgtccaaaggttgttgctttgtactgcatcaagggcaagatagaa
gttgatcaagcgggaccaggtgactatgtgtcaatccacatagtccctccacataacgac
atccaccctggcgctgtgctctcctccggcggtgctctcagtcgcactaagtcttttact
gcggagttgcgtttcctaaagacgcctgctaggatgtataatggtttcaaagccatgcta
cacatccattcactagaggtgcataattgtgagattgttgaaatgaaaaaattcaccaat
ggatcctggtcaggaagaaggcgttttgtgaaagaaggggaatttgctctctgccgtata
gaggttcctgaggactacatcagcatagaagaaattgctaattttcctcaacttggggag
ttagttttaagaactgaaggatatacagttgcggttgggaatgtcatctcttgggaccaa
gatgaagatgttgtgatggctggattttga
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