Raphanus sativus (radish): 130501238
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Entry
130501238 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130501238
04121 Ubiquitin system [BR:
rsz04121
]
130501238
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130501238
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130501238
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130501238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
Zf_IFT144_1st
HypA
zf-RING_5
RING_XB3-XBAT31
zf-C4
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
130501238
NCBI-ProteinID:
XP_056852108
UniProt:
A0A9W3CLD4
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MEETMAARYWCHMCSQMVNPTMESEIKCPFCQSGFVEEMSGNGGLRDVQDPETEFGTTDR
AMSLWAPILLGMMSSPRRRRRFRRAELGSEEEDNNEDDDVVDRHHHHHRARRHGGEIDLD
REFESILRRRRRSSGNILQLLQGIRAGIASEYESSDNNERVIMINPYSQSLVVRGSSDQT
QTQTHSALTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKITEPSLQC
SVCLDDFERGVDEAKEMPCKHKFHVKCIVPWLELHNSCPVCRFELPSGNDDGDGESKVES
GGGARTRSVPESSDREVVENVGERGREDEARSGNGRRFSIPWPFSGFFSSSSSSSSSSSA
SGSSQSGESNVYSRSYGSSR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaatggcggcgaggtattggtgtcacatgtgttcacagatggtgaacccc
acaatggaatccgagatcaaatgccccttttgccaaagcggattcgtcgaagaaatgagc
ggtaacggaggcttaagagacgttcaagacccagaaacggagtttggaacaacagaccgt
gccatgtctctatgggcaccgatcttgctcgggatgatgagcagtcctcgtagacgaaga
aggttcagaagagcagagctcggttcagaagaagaagacaacaacgaagacgacgatgtt
gttgatcgtcatcatcatcatcatagagctagaaggcacggtggagagattgatttggac
agagagttcgagtctatcttgaggagaagacggagaagctcggggaatatactgcagctg
cttcaagggatccgcgcagggattgcttctgagtacgagagctctgataacaacgagaga
gtgatcatgatcaatccgtatagccagtccctcgttgtgagaggatcttctgatcagact
cagactcagacccattctgcgttgacttcgcttggagactacttcattggacctggtttg
gatctcttgcttcagcatttggctgagaacgatcccaacagacaagggactccgcctgct
cgtaaagaagcggttgaggctttgccgacggttaagataacggagccgtcgttgcagtgt
tcggtttgtttggatgatttcgagagaggtgttgatgaagcgaaagagatgccgtgtaag
cataagtttcatgtcaagtgtattgtcccgtggctcgagcttcataactcgtgtcccgtg
tgtcggttcgagcttccttctggtaatgatgatggtgatggtgagagtaaggttgagtca
gggggaggagcgaggacgagaagtgttcctgagagtagtgacagagaggttgtcgagaat
gtgggggagagaggaagagaggatgaggcgaggagtgggaatgggagaaggttctcgatt
ccatggccgttcagtggtttcttctcttcttcttcttcttcgtcttcttcttcttcggca
tctggatcatctcagtctggtgagagcaatgtctactcaagatcttacggttcttctcgc
tga
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integrated database retrieval system
