Raphanus sativus (radish): 130501288
Help
Entry
130501288 CDS
T06014
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130501288
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130501288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
PhoLip_ATPase_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
130501288
NCBI-ProteinID:
XP_056852160
UniProt:
A0A9W3CKS2
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MFLFSSHVLHLVTTTGHQRHLLRQRGWMIALIMFLSLFEIAISQNQSCDPESTQVLQLLY
QDGHVVIDNGIFQLTLSNPEGFVTGVKYNGIENVLAYTGHENDRGYWDLVWNFPGKKTKK
TKGTLDRIEATKMEVITQNDEQIEISFSRTWNASSNVTVPVNIDKRFVVLLNSSGFYSYA
IFERLQGWPAVEIDNIRLAIKLDKDKFDYMAISDERQRYMPLPDDRIPPRGKPLAYPEAV
QLLDPIEPEFKEEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFL
GSHVGPTNLAIFHSTHYVGAELIMSFEEGEAWKKVFGPVFIYLNSFPKEVDPLLLWHEAK
NQTKIEEEKWPYNFTTSSDFPASDQRGFVSGRLLVRDQYISSEKIPANGSYVGLAAPGDV
GSWQREYKGYQFWSKADEEGYFCINNVRSGRYNLYAFVPGFIGDYHNDTVFDVSPGSNIC
LGELVYEPPRDGPTLWEIGVPDRTAAEFYIPDPNPMFVNKLYVNSSDNKYRQYGLWERYS
ELYPDEDMVYDVDVDDYSKDWFYMQVTRKRDDGGYNGTTWEIKFQFDDQVTNLTGDFKLR
IALATSNVAELQVRVNDVSVDPPLFTTGQIGKDNTIARHGIHGLYWLYSVNVPASSLGPG
CNSIYLTQPLAISPFQGLMYDYIRLEYPDSVYHIT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgttctcttcacatgttttacatctcgtgactaccacaggtcaccagagacac
ttattgagacaaagaggatggatgattgctttgatcatgttcttgtctttgtttgagatt
gctatctctcagaaccaaagttgtgatccagaatcaacacaagtcttgcaattactttac
caagatgggcatgtggtgattgataacggaattttccaattaactttgtcaaatcctgag
ggatttgtgactggagttaagtacaatggtatcgaaaatgtgcttgcctataccggccat
gaaaatgatagaggttactgggacttagtgtggaactttccaggaaagaaaactaaaaag
accaaaggcacattagaccggattgaagcgacaaagatggaagtgataacgcagaacgat
gaacagatagagatatcgttttcaaggacatggaatgcttcttcaaatgtgactgttcca
gtgaatatagacaagaggtttgtagtgctgctgaactcgtccgggttctacagttacgcc
atattcgagaggttacaagggtggcctgctgttgaaattgataatattcgattagcaatt
aagctagacaaggacaagtttgattacatggcgatttcagatgagaggcaaaggtacatg
cctctaccagatgataggattccacctcgaggtaagcctcttgcttaccccgaggccgtt
caacttctcgaccctattgagcctgagttcaaagaagaggtggatgacaagtatgaatac
tcaatggagagtaaagacataaaagttcatggatggataagcaccaacgattcagttggg
ttctggcagatcactccaagcaacgagttccgatctgctggtcctctcaagcagttccta
ggctctcatgtcggtccaaccaacctcgcgatatttcacagcactcactatgttggagca
gaactaatcatgagttttgaagaaggtgaagcatggaagaaagtgtttggacctgtcttt
atttatctcaactcttttcctaaagaagttgatcctctcttgctctggcatgaagccaag
aaccagacaaagattgaagaagagaagtggccttataacttcacaacttcaagtgatttt
cctgcatctgaccaaagaggattcgtcagcggtagattactcgttagagaccagtacata
agcagtgagaagatacctgcaaacggttcctacgtggggttagctgcaccaggagatgtt
gggtcatggcaaagagaatacaaaggttaccagttctggtcaaaggccgacgaagaagga
tacttttgtataaacaatgtgagaagtggtcgttacaatctctatgcgtttgttcctgga
ttcatcggtgattaccacaacgacaccgttttcgacgtttctccaggttcgaatatatgc
ctaggagagttggtgtatgaacctccaagagacggtccgactctatgggaaatcggtgta
ccggaccgaaccgctgcagagttctacattcctgaccctaacccgatgtttgtgaacaaa
ctatacgtaaacagttctgataataaatacagacaatatggattgtgggaacggtattca
gaactgtaccccgatgaagatatggtctacgacgttgatgttgatgattactctaaagat
tggttctacatgcaagtcacacggaagcgagatgatggaggatacaacggtactacatgg
gagatcaagtttcaattcgacgatcaagtgacaaatcttacgggagatttcaaactgcga
atcgctctagccacatcaaatgtagctgaattgcaggttcgggtgaacgatgtttctgtg
gatccaccactgtttacgacggggcaaataggaaaagataatacaatcgcaagacatggt
attcatggactgtattggttatacagtgtgaatgtgcctgcttcgtctcttggcccggga
tgcaactccatctatctaacacaaccgcttgccataagcccgtttcaaggactcatgtac
gattacattcgtctagagtatcctgattctgtttatcatatcacttag
DBGET
integrated database retrieval system
