Raphanus sativus (radish): 130501316
Help
Entry
130501316 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 26-like
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
130501316
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
130501316
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130501316
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130501316
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130501316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
130501316
NCBI-ProteinID:
XP_056852184
UniProt:
A0A9W3CL49
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MRPNTRNKNKRQRPSDTVDSSSQILRKIYEANEVTEEDLNQLLMIHKPLCQQTSSSCRVN
TRQNPNCFCALAPPPNATRKSGLWQKTSDIILQSLGPDLSSNRRAASPASTPAGLTNLGA
TCYANSILQCLYMNTAFREGVFSVELEVLNQFPVLDQIARLFAQLRGGVRRFVDSEAFVK
TLELDNEVQQDTHEFLTLLLSLLERCLSRSGVSKAKTVVQDLFRGGVSHVTTCLKCGRDS
EASSKVEDFYALELNIKGLKSLDDSLNDYLSLEHLDGDNQYFCGSCDARVDATRCIKLRT
LPPVITFQLKRCVFLPKTTAKKKITSSFSFPRVLDMRSRLAESSENELTYELSDVLIHKG
SAVNSGHYVAHIKDEETGLWWKFDDEEVSKLGTHPFNEGSSSTPKSESNAASSSNGNSTE
SEVFSSTDAYMLIYSLRRSKAESREGQRENPIDITKGDVDGVQQPEGGYLPPHLDKWITD
LNATFLEVCKQFDLRKERELNTLTERRQEVRTILSEAAVQSLEEEYFWISTDWLRLWADT
ISPPALDNTPLLCSHGKFLASKITCMKRISELAWTKLESKFNGGPKLGKGDYCRECLMDG
ARMVVSSDSYRDRRTFMKSIAGDILSRKCEDGQYYVSKAWLQQWVKRKNLDGPSEADAGP
TNAITCCHGGLMPEQAPGAKRIIIPENFWSFLVEDALKVTPEDTSGCHCFPMDSSQCSHC
TSGLSEVADVEDALRTIKAKQRQNHEKLATGKGIALTPQSRYFLLPSPWLVQWRSYINMT
GKNSSSVPEPELLNGVIDTLKCEKHTRLLERLPELVCKRGSFFQKSPCTDKLTIIPEDDW
KCFCEEWGGIMENGVSAFVETGNNRNGSASQDVIDLENDMDIDSQQLILRTSPEVCEECI
GERESCELMQKLSYSEGDVSVCLVRGKEAPKSMLEASDSSFEVERRTSKRSRRTNYGTQT
TSLKVSAATTVYQLKMMIWELLGVSKENQELHKGTQVIDEESATLADMNIFPGDKLWVRD
TEIHEHRDIADEICDKKTGHRDIEAGFRGTLLTGDITSEAG
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaaacactcgaaacaaaaacaaaaggcaaagaccttcagatactgttgattcc
tcttctcaaattctccgaaaaatctacgaagcgaatgaagtaaccgaggaagacctaaac
caactcctcatgatccacaagccactctgtcaacaaacctcctcctcctgccgcgtcaac
acccgccaaaaccccaactgtttctgcgccctcgctccacctcccaacgctacccgcaaa
tccggtctctggcaaaagacctccgacatcatcctccaatctctcggccccgatctctcc
tctaaccgtcgcgctgcttctcctgcctccacccccgccggtctaaccaatcttggcgct
acttgctacgccaacagtatactccagtgcctctacatgaacaccgctttccgggaaggc
gttttctctgttgaactcgaggttctgaatcagttcccggtcttggatcagatcgcgagg
cttttcgcgcagctgcgtggcggcgtcaggcgtttcgtcgactctgaggcctttgtgaag
acgcttgagttggataatgaggttcagcaggatacgcatgagttcttgactttgcttttg
tcattgcttgagcgctgcttgagccgttctggtgtttccaaggctaaaacggttgtgcag
gatctcttccgcggtggtgtctctcatgtgaccacgtgcttgaaatgtgggagggattcg
gaagcttcctcaaaggtggaggacttttatgcacttgagttgaatatcaagggtcttaag
agtttggatgatagtttgaatgattaccttagcttggagcatcttgatggggacaatcag
tatttttgtgggagctgcgatgctagagtagatgctacgcgctgcattaagctgcgcaca
ctacctcctgttatcacttttcagctcaaacgatgtgttttcctccccaagactactgct
aagaagaaaattacatcctcgttttcctttcctcgagtgttggatatgcggtcgaggctg
gcagagtcttctgagaatgagttgacatacgaactctctgatgtgttaatccacaaagga
agcgctgtcaacagtggacattacgttgctcacataaaagatgaagagactggcttgtgg
tggaaattcgacgatgaggaagtgtcgaaactgggtacacatccattcaacgaaggctct
tcttcaactccaaagtccgagagtaatgctgcctcctctagtaatggaaactccacagag
tcagaggttttctcatccaccgatgcttatatgctgatttatagtcttcgacgcagtaaa
gcagaaagtcgggaaggacaaagagagaatcctattgacataactaaaggagatgttgat
ggtgttcaacagcctgaaggtggttatcttccgccacatctcgataagtggatcactgac
ctgaacgcaacattccttgaggtttgcaagcaatttgatttaagaaaggaaagagagttg
aatactttgactgaaaggaggcaagaagtaagaacaatactttcagaagctgctgttcag
tcacttgaagaagaatatttttggatctccacagattggcttcgtctatgggctgatacc
atctcgcccccagctttggacaacacccctttattgtgttcccacgggaaatttcttgcc
tcaaaaattacttgcatgaagcgtatatctgaacttgcatggaccaagttagaatcaaag
ttcaatggtggaccaaagttagggaaaggggactactgcagggaatgccttatggatggt
gctcgcatggttgtctcttctgacagctatagggatcgaagaacattcatgaaaagcata
gcaggcgatattctttcgagaaagtgtgaggacggacagtattacgtctctaaagcatgg
ttgcagcaatgggtaaaaaggaaaaaccttgatggtcctagtgaagcagatgcaggcccc
acaaatgcaatcacgtgctgtcatggggggctgatgcctgagcaagcgccaggggccaaa
aggattataattccagagaacttctggtcattccttgttgaagatgctttaaaagtgacg
ccagaagatacttcgggttgtcattgtttccctatggactccagccaatgttctcactgc
acatcgggactttctgaggttgctgacgtcgaggatgcactaagaacaataaaggccaag
cagcgccaaaaccacgagaagttagctaccggaaagggtatagcattaacgccacaaagc
cgatatttcttgttgccttctccgtggctagtacagtggagaagctatattaacatgact
ggaaaaaacagttcctcagtaccagaaccggaacttcttaatggagtcattgatactctc
aagtgcgagaagcacacacgactccttgaaaggcttcctgaacttgtctgcaaacgtggc
tcattttttcagaaaagtccatgtacggacaagctgacaatcatccctgaggatgattgg
aaatgtttctgtgaggagtggggagggatcatggagaatggagtctctgcttttgttgag
actggtaataataggaatggaagtgcatctcaggacgttattgaccttgagaatgatatg
gacattgatagtcagcagcttattcttaggacatccccagaggtttgtgaggaatgcata
ggagagagagagagctgtgagttgatgcagaagctcagttactcggaaggagatgtatct
gtctgcttggtgcggggaaaggaagctccaaagtcaatgttagaagcatctgactccagc
tttgaggtggaacggcgtacctcaaagcgttcacggagaacaaactatgggacgcagacc
accagcttgaaggtttctgcagcaacgactgtgtaccagttaaagatgatgatatgggaa
ttacttggggtgtcgaaggagaaccaagaacttcacaaaggcactcaagtgattgatgag
gaatctgcaactcttgctgacatgaatatattccctggcgacaagctttgggtgagagat
accgagatacatgaacaccgcgacattgctgatgagatatgcgataagaagacagggcat
cgagatatcgaagcagggtttcgcggtacgcttttgactggagatattacttcagaagcc
ggctag
DBGET
integrated database retrieval system
