Raphanus sativus (radish): 130501425
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Entry
130501425 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130501425
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
130501425
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130501425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
CoV_Methyltr_2
Motif
Other DBs
NCBI-GeneID:
130501425
NCBI-ProteinID:
XP_056852331
UniProt:
A0A9W3CL77
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MGKGKVKGKHRLDKYYRLAKERGYRSRASYKLIQLDLKYSFLHKSRAILDLCAAPGGWMQ
VAVQKAPVGSLVLGIDLVPIGAIQGCVAIQQDITRPECRSKIKQVLEKHGVKAFDLVIHD
GSPNVGGAWSQEAMSQNALVIDSVKLATEFLAGGGNFITKVFRSRDYSNVQFCLKKLFEK
VEVFKPPASRSASAETYLLGFNYTAPGKIDPRLLDFRYLFKEQEETTRKVVDVLGKNKQK
RNRDGYQDGESILRKVASAADFIWSENPLEVLGTVTLISFDDEASLPIKEHELTSDEIKI
LCEDLPVLGKNDFKYILKWRMQMRKALTPEKKEVAKTEPEAEKEEENEDDKLLNELEELT
NAVDRKKKQAKKLLAKRRAKDKTRTNPQIDALEDGYVDHDLFSLAAIKGKKDLMAVDNDE
DDNIHANDIENEDRVVEASDDSEDSGLDSDEERQRYTEQMEEAFDEAYDRYMVKREGSAK
QRKRARQAHAEKLEEEGDGDEEMKVDYDSDMNVEMDEANPLVVPLDDGETQTKEEISNQW
FSQDIFAEAVEEGDLGQDDSDDDMPTKKNLSKAEKTKKKKAAKAIGTSDKTSLANSKKED
DFEIVPAPVTDSDSDSSSDDDNVHTKAEILACAKKMLRKKQREEMLDDAYNKYMYGDEGF
LPKWFLDDEKQHRQPMKPVTKEEINAMKAQFREINARPAKKVAEAKARKKRAAAKRLEKV
RKKANVISDTPDIADRSKDKMIDKLYKKAAEPRKPRKELVVSKKGVGVKVGKGQKRVDRR
MKSDARQRGGGKPGRKGKKSAAGNKSGQKKPRGKRPMGGG
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagggtaaggtcaagggaaagcatcgtttagacaagtactaccgcctcgccaag
gagcgcggctaccgctcccgtgcctcctacaagctcatccagctcgacctcaagtactcc
ttcctccacaaatcccgagccatcctcgatctctgcgccgcccccggcggttggatgcag
gtcgccgtccagaaagcccccgtcggcagcctcgtcctcggtatcgatctcgtccccatc
ggcgccatccaaggctgcgtcgcgatccagcaggacatcacgaggcccgagtgcaggtcc
aagatcaagcaggtgctcgagaagcacggcgtcaaggccttcgatctggttatccacgac
gggtctcccaacgtcggcggggcttggtctcaggaggcgatgagccagaacgctttggtt
atcgattcggttaaattggctactgagtttttggctggtggtgggaatttcatcaccaag
gttttcaggtcgcgagattacagcaatgtacagttttgtcttaagaagctgtttgagaag
gttgaagtgtttaagccgccggctagtcgttcagcgtctgctgagacgtatcttttgggt
ttcaattacacagctcctggcaagattgatcctcgtcttcttgattttagatatctcttc
aaggagcaagaggagacaactagaaaggttgtggatgtgcttggaaaaaataaacagaag
aggaaccgtgatgggtatcaagatggagagtccattttgagaaaagttgcatctgctgct
gatttcatttggtctgagaatcctcttgaggttcttggcacagttactttgatatccttt
gacgatgaagcctctctgcccataaaggaacatgaattgacttcagatgagattaaaatt
ctttgcgaagatcttccggttttggggaaaaatgacttcaagtacatcttaaaatggcga
atgcaaatgaggaaagctttgactcctgagaaaaaggaagtcgctaaaacggagcctgag
gcggagaaggaagaggaaaatgaagatgataaactgctcaatgaattagaagagctgaca
aacgcagtagatcgcaagaagaaacaggcaaagaagcttctcgcaaaacgacgggctaag
gataagacgcggaccaatccacagatagatgcacttgaagatggttatgtcgaccatgat
ttgttctctcttgctgctatcaagggaaagaaagatcttatggctgttgacaatgatgaa
gatgataatattcacgccaatgacattgagaacgaagaccgtgttgttgaagcttcagat
gactccgaggacagtggtctagattctgatgaagaacgtcagagatacactgaacaaatg
gaagaggcttttgatgaggcatatgaccggtacatggtgaagagagaaggaagcgcaaag
caaaggaagcgtgctagacaggcacacgctgaaaagctggaggaggaaggtgatggagat
gaagaaatgaaagtagattacgactcagatatgaatgtagagatggatgaggcgaaccct
cttgtggtaccacttgatgatggagagacccaaactaaagaggaaatatccaaccaatgg
ttcagtcaggacatatttgcagaagccgtggaagaaggagacttgggacaagatgacagt
gacgacgacatgccaactaagaagaacctgtctaaagccgagaagacaaagaagaagaag
gcggcgaaagcaatcgggacgtctgataagacttcactcgctaactctaagaaggaagac
gatttcgagatagtccctgcaccagtcacagattctgactctgattcatcctcagatgat
gacaacgttcatacaaaagcagagatattggcctgcgccaagaaaatgctaaggaagaag
cagagagaagagatgctcgacgatgcttataacaagtacatgtatggcgacgaaggtttt
ttgcccaaatggtttttggatgacgagaagcagcacagacaaccgatgaaacccgtcact
aaagaagaaatcaatgcaatgaaagctcagttcagagaaatcaacgctcgcccggccaaa
aaggtggcagaggccaaggcaaggaagaagagagccgcggcgaaaagattggagaaggtg
aggaagaaggcaaatgtaatatccgacacaccggatattgccgaccgttctaaggacaag
atgatagacaagctatacaagaaagcagctgagccgaggaagccgaggaaagaactggtt
gtgtcaaagaaaggagttggtgttaaggttgggaaaggacagaagagagtggataggagg
atgaagagtgacgctaggcaacgtggaggaggcaagcctggtaggaaggggaagaagagt
gctgctggtaataaatcaggccagaaaaaaccgaggggtaaaagacccatgggcggcggg
taa
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