Raphanus sativus (radish): 130501639
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Entry
130501639 CDS
T06014
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5-like
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
130501639
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
130501639
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Other ribosome biogenesis factors
130501639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
FtsJ
Methyltransf_31
PCMT
AcetylCoA_hydro
Methyltransf_4
RrnaAD
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
130501639
NCBI-ProteinID:
XP_056852462
UniProt:
A0A9W3CLQ9
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MARRKSNAPPKATRQPSKQPSSGAERSALYARREAAKILHTVLRGDAERRAVASIKSLVF
SPSVRNKRGTFALVCETLKHLDVIKDVLEIANVLNSKWKRQEPLVYIICYDILFGKETPS
IGDAEKFLVRRKDALLSGLATLLVRKNVKNVEELLDLSQLNGHIKPRYVRVNTLKMDVDS
AVKELEKLYKVQKDETVPDLLVMPPGSDLHAHPLVMNGRIFLQGKGSSMVAAALQPQAGW
EVIDACSAPGNKTVHLSALMKGQGKIIACELNEERVKRLEQTIKLSGATNIEVFHGDFLS
LNPEDPSFAKVRAILLDPSCSGSGTITDRLDHLLPSHSADNKNYDSIRLHKLAVFQKKAL
AHALSFPQVERVVYSTCSIHQIENEDVVSSVLPLASSLGFELATPFPNWQRRGLPVFAGS
EHLLRMDPVEDKEGFFIALFTKTTNKLDNPKPYELPEGECRRRRKQFYPFLWPKVFFRAW
NGRLHGSRR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgcaaatcaaacgcgccgccgaaagcaacacgacagccgagcaagcaacca
tcttccggcgccgagagatcagctctatacgccagaagggaagccgccaaaatcctccac
accgttctccgaggcgacgccgagcgccgagccgtggcttcgataaagtcgctcgtcttc
agcccttccgtgcgcaacaaacgcggcacgttcgctctcgtctgcgagacgctaaagcat
cttgatgtgattaaggatgttcttgaaattgctaacgtgttgaatagcaaatggaagagg
caagagccattggtctacattatctgctatgatatccttttcggcaaggagactccatcg
attggtgatgctgagaagtttcttgtgcgccgtaaagatgctctactgtcaggtctagcc
acgcttcttgtgaggaagaatgttaaaaacgttgaagagttgttggatctttctcagctc
aatggtcatataaagccacgttatgttcgtgtaaatacacttaagatggatgtagattca
gcagtgaaggagctggagaaactgtataaggtgcagaaggatgagacagttcctgacttg
ttagtgatgccacctggcagtgatttgcatgctcatcctttggttatgaatgggcgtata
tttttgcagggaaagggaagttcaatggtagcagcagcactgcagccacaagcaggttgg
gaggttattgatgcctgttcagctccaggtaacaaaaccgttcatctttctgctcttatg
aaaggacaaggaaaaatcatagcgtgtgagctaaatgaagaacgtgtaaagcgcttggaa
cagactattaagctatctggtgctaccaatattgaagtctttcatggtgattttctgagc
ctaaatccggaagatccttcttttgcaaaggttcgggctatattgttggatccatcttgc
tctggctctggaaccattacagatcgtctggaccatctccttccttctcattcagcagat
aacaagaactatgactccataagactgcacaagctcgctgttttccagaagaaggctctt
gcccatgcactctcctttccacaggttgagagagtagtatacagcacatgctccatccac
cagatagaaaacgaagatgtggtctcatctgtcttacctctggcttcatccctcggcttc
gaacttgctactccttttcctaactggcagcgtcgtggtctccctgtattcgcaggatct
gaacatttactcaggatggatcctgtggaggacaaagaagggttcttcatcgctttgttc
accaagacaacaaacaaacttgataacccaaaaccgtatgagcttcctgaaggagagtgt
cgacgaagacgcaaacagttttatccttttctttggcccaaagtgttcttcagagcttgg
aatggtaggttgcacgggtccaggaggtaa
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integrated database retrieval system
