Raphanus sativus (radish): 130501757
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Entry
130501757 CDS
T06014
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130501757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130501757
03029 Mitochondrial biogenesis [BR:
rsz03029
]
130501757
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
130501757
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130501757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
BCAS3_WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
130501757
NCBI-ProteinID:
XP_056852560
UniProt:
A0A6J0N1D1
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MANQSSPSSIYCASFNQDNSGFAISSRDSFKIFDSTTGRLCYERAAGAFVIVEMLYSSDL
LALVGAGEQASLSPRRLCLFNTTRGSPLKELNFLTSILAVRMNKKRLVVVLVEKTFVYDL
NTLVMLDTIDTVPNPKGLCAFSPSLEGCFLAVPASTTKGAVLVYNVIDLQSHSEIDAHRS
PLAAIALSSNGMYIATASEQGTLIRVHLVSESTKSYSFRRGTYPSTIYSLSFGPSTQLPD
ILIATSSSGSIHAFSLMLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQNAVPSGIR
SYAVVRKIEKLEGTSSPSQFTSIRATVSVITYSGYFQEYTLSINSKNESLWTLEREFNLY
PVISS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcagtcgtctccatcttctatctactgtgcatctttcaatcaagataacagt
gggtttgcgataagttcgagagattccttcaaaatattcgattcaactacaggcagactc
tgttatgaacgagctgctggagcttttgttattgttgagatgttgtatagctctgatcta
cttgcacttgttggagctggtgagcaggcttctctatctccaaggcgactctgcttattc
aataccacaaggggttctcctcttaaagaactgaattttttgacttctatacttgctgtc
cgtatgaacaagaaacggcttgttgttgtgctggtggagaaaacattcgtttacgacttg
aatacgcttgttatgcttgatactatcgacaccgtgccaaatccaaaaggtctctgtgcg
ttctctccaagtcttgaaggctgcttcttagctgttccggctagtacaaccaaaggagct
gttttggtgtataacgtcattgatttgcagtctcacagtgagattgatgcacatcgttct
ccattggctgcaatcgcactctcttcaaatggaatgtatattgctacagcatctgagcaa
ggaactctgatccgagtccatcttgtttctgaatcaactaagtcatatagtttcaggaga
ggaacatacccatcaacaatatactcactctcttttggaccatccacacagctaccggat
atattgattgcgacgagttcttcaggctccatccatgccttctctttaatgttggccata
aaccaaagaagcaaaaggtctactagctttcttggatcagttcttccagacagcgtgagt
gatgcactagacccagcgcatcaccacgtgcttcaaaatgcagttccttccggaattaga
agttatgcagtggttaggaagatagagaaacttgaaggaacatcatctccatctcagttt
acatctattagggcgactgtatcagtgattacatatagtgggtatttccaggagtatacg
ttgagtatcaatagcaagaatgaatcgttatggacactggaacgtgagttcaacctctac
cccgtaatcagcagttga
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