Raphanus sativus (radish): 130501812
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Entry
130501812 CDS
T06014
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
130501812
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130501812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
RsmF-B_ferredox
FtsJ
DUF3369
Motif
Other DBs
NCBI-GeneID:
130501812
NCBI-ProteinID:
XP_056852615
UniProt:
A0A9W3CMD6
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MEMNHPSSRYSYEPVLRWDPEVEDYFNKAYGPDHFARISKALTRPSCYSCIRVNTVKTTS
DAVIEKLTNLLNESEDGLKLVQSDGSSPISKCQIPGLEYVVFVNGSGPHRIDYGSSPETP
PKEVLVSRKCAEAVLRGAQVYVPGVLACTAHVEKGDAVAVCVAMEQPNDEGDWSVNMTRG
TTLQGQPTDPFYCERSGLYIGMGTAMLSRAGMFRVSHGVAVDLNNRVFRLPSFHNVLEGE
IFLQNLPSIVAANALDPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKVLDV
QRLSAEMGLTCITTCKLDALKSVCLPSTLSDSTTSVNGENSGSMISHSELSSKEEIASDA
SRTSEAENSGEKNESTKQRNGGDNVSQSEIRKNKGRLKNGRGRTQSQGGRAGKSKGFPPN
SFDRVLLDAPCSALGLRPRLFAGLETVISLRNHGRYQRKMFDQAVQLVRVGGVLVYSTCT
INPSENEAVVRYALDKYKFLSLAPQHPRIGGPGLVGRCEFPDGYVEEWLKPGEEEMVQKF
DPSSELDTIGFFIAKFSVGPKD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaatcatccttcgtcgcgttacagttacgaaccagtgttgcgatgggatcct
gaagttgaagactacttcaataaagcttacggacctgaccactttgctcgaatttcaaag
gctctcacgcgtccatcttgctactcctgcattcgggtgaacacagttaaaaccacaagc
gacgcggttattgagaagcttacgaatctcttaaacgaatccgaggatgggttgaagcta
gtgcagtccgatgggagcagtcccatctccaagtgtcagattcctggtttggaatacgtt
gttttcgtcaatggttcaggcccacatagaattgactatggctctagccctgaaacccct
cccaaggaggtacttgtgagcaggaagtgtgctgaagcagtcctcagaggagcccaggtc
tatgtcccaggtgtactggcttgcactgctcatgttgagaaaggagatgcagttgccgtc
tgtgttgctatggaacaacctaatgatgaaggtgactggagtgttaatatgactcgtggc
accacccttcagggtcaacccacagatcctttctactgtgaacgcagtggactatatatt
ggcatgggaacagctatgttgtcaagggctggcatgtttcgtgtttctcatggagttgcg
gttgatttgaacaacagagttttcagattgccttcttttcataatgtcctggagggagaa
atatttcttcaaaacctgccaagtattgttgctgctaatgctcttgatcctcagaaaggg
gagagaatactagatatgtgtgcagcaccgggagggaagactactgcaatagctatactt
atgaatgatgaaggagagatagtggcagcagatagatctcataacaaagtgctggatgtc
cagagattgtctgctgagatgggcttaacttgcataacaacatgtaaattggatgcgcta
aaatctgtttgtcttccgagcacactcagtgattcaacaacatcagttaacggtgaaaac
agtggttctatgatcagccattctgaattatcatcaaaagaggaaatagcatctgatgct
tctagaacatctgaggctgaaaactcgggcgagaaaaatgagagcactaaacagcgaaat
ggaggggataacgttagccaatctgaaatcaggaagaataagggaaggctgaaaaatggt
cgcggaaggactcaaagccaaggtggaagggctggaaaatcaaaaggtttcccgcctaat
agttttgatagggtccttttagatgctccttgttctgctcttggcttgagacctcgtctt
ttcgctgggctggagactgtaatatctttgagaaaccacggaaggtaccagcgtaaaatg
tttgaccaggctgttcaattggttcgcgttggtggagttctcgtatactcaacatgcaca
attaaccctagtgagaatgaggcggtggttcgctatgctctagataaatacaaattcctt
tccttagcaccacagcatcctaggattggaggccctggtctagttggccgatgtgaattt
cccgacggatatgtcgaggagtggttaaaaccaggtgaagaagaaatggttcagaagttc
gacccgtcatctgagctcgataccatcggtttcttcatagctaagttcagcgttggcccc
aaagattaa
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