Raphanus sativus (radish): 130501940
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Entry
130501940 CDS
T06014
Name
(RefSeq) autophagy-related protein 18b-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130501940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130501940
03029 Mitochondrial biogenesis [BR:
rsz03029
]
130501940
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
130501940
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130501940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
130501940
NCBI-ProteinID:
XP_056852729
UniProt:
A0A9W3CMS1
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MANQSSPSSIYCASFNQDNSGFAISSRDSFKIFDSTTGRLCYERAAGAFVIVEMLYSSDL
LALVGAGEQASLSPRRLCLFNTTRGSPLKELNFLTSILAVRMNKKRLVVVLVEKTFVYDL
NTLVMLDTIDTVPNPKGLCAFSPSLEGCFLAVPASTTKGAVLVYNVIDLQSHSEIDAHRS
PLAAIALSLNGMYIATASEQGTLIRVHLVSESTKSYSFRRGTYPSTIYSLSFGPSTQLPD
ILIATSSSGSIHAFSLMLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQNAVSSGIR
SYAVVRKIEKLEGTSSPSQFTSIRATVSVITYSGYFQEYTLSINSKNESLWTLEREYNLY
PVISS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcagtcgtctccatcttctatctactgtgcatctttcaatcaagataacagt
gggttcgcgataagttcgagagattccttcaaaatattcgattccactacaggcagactc
tgttatgaacgagctgctggagcttttgttattgttgagatgttgtatagctctgatcta
cttgcacttgttggagctggtgagcaggcttctctatctccaaggcgactctgcttattc
aataccacaaggggttctcctcttaaagaactgaattttttgacttctatacttgctgtc
cgtatgaacaagaaacggcttgttgttgtgctggtggagaaaacattcgtttacgacttg
aatacgcttgttatgcttgatactatcgacaccgtgccaaatccaaaaggtctctgtgcg
ttctctccaagtcttgaaggctgcttcttagctgttccggctagtacaaccaaaggagct
gttttggtgtataacgtcattgatttgcagtctcacagtgagattgatgcacatcgttct
ccattggctgcgatcgcactctctttaaatggaatgtatattgctacagcatctgagcaa
ggaactctgatccgagtccatcttgtttctgaatcaaccaagtcatatagtttcaggaga
ggaacatacccatcaacgatatactcgctctcctttggaccatccacacagctaccggat
atattgattgcgaccagttcttcaggctccatccatgccttctctttaatgttggccata
aaccaaagaagcaaaaggtctactagctttcttggatcagttcttccagacagcgtgagt
gatgcactagacccagcgcatcaccacgtgcttcaaaatgcggtttcttccggaattaga
agttatgcagtggttaggaagatagagaaacttgaaggaacatcatctccatctcagttt
acatctattagggcgactgtatcagtgattacatatagtgggtatttccaggagtatacg
ctgagtatcaatagcaagaatgaatcgttatggacactggaacgtgaatataacctctac
cctgtaataagcagttga
DBGET
integrated database retrieval system
