Raphanus sativus (radish): 130501953
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Entry
130501953 CDS
T06014
Name
(RefSeq) crossover junction endonuclease MUS81-like
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130501953
03460 Fanconi anemia pathway
130501953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
130501953
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130501953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
EarA
BORCS6
DUF4364
Motif
Other DBs
NCBI-GeneID:
130501953
NCBI-ProteinID:
XP_056852744
UniProt:
A0A9W3CMP2
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MDDERRVVCRENQCLVDYLLQKKREQVDKPEGLSVNMERTFVKAYRNVCDSKDPISTLKD
LFHIKGFGKWMLTLMKGYFDNGTASSVQKAKERKRYIPQRNSAAYGLLITLHRGTQNVKD
FMRKQDLIDATDASGLSHASIAPEKGKGKIGLGLSKREYYSGWSCMTTLIHKGLVIKYSN
PAKYKLTVQGREVADECIMRSGLSINDEIDIAQTHAHVRSKADSSAGTSRAQTCEVDILT
DDEMDIAQPYTHPKSKEHFSAGTSRAQTCMVFNNHNILYCCVRDISQSLGHKLTGHVDLE
RSRFKKFRSSSDGYTLTPRSSSSSHAFKDCSSSVCNPFAFTRLLAVWCDLDQAQTFHGLI
GMIYEVLDREKRRTLSTAWKQLEQEGFNQLSFTGAMDINPHVQFMVTQLASGGTINAPRL
PPLTFGEKFEEVYQVIMILDDREQFATNGKKIENICSRYEIKIEVRRLPVGDCIWIARHK
YLGTEYVLDFIVERKSVDDMRSSIIDGRYRDQKLRLQRSGLRKLMYILEGDPNQSEAAEI
IKTACFTTEILDGFDVLRSSGLKDTLRNYSDLTKSIHQYYKSRVNGDQNKVVASCPSFDS
FVKRCQDLEKMTVSDVFAIQLMQVPQVTEEIAIAVVDMFPTLVSLASAYSNLDGNKPAQE
EMLRNRSKNVICGTASKNIFKLVWSE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgagagaagggtagtgtgtcgagaaaaccaatgtttagtagattacttgtta
cagaagaagcgagaacaggtagataagcccgagggcttgtcggtaaatatggagaggaca
tttgttaaggcgtatagaaatgtctgcgactccaaagatcccattagcacactcaaagac
ttgtttcatatcaagggcttcggaaagtggatgcttacgctcatgaaaggatactttgat
aatggaactgcaagttccgtgcaaaaggccaaggagagaaaacgttacattccccaaaga
aactctgctgcttatggattactaataacactgcacagagggactcagaatgtgaaagat
ttcatgcgtaaacaagaccttattgatgctactgacgcaagtgggctctcgcacgcttct
atcgcgccagagaaaggaaaagggaaaataggtcttggcctctctaagagagagtattat
agtggatggagctgcatgacgacgcttatacataagggattagtgattaaatatagcaac
ccagcaaagtacaagctgacagtccaaggtcgagaagtagcagatgaatgtattatgcga
tctggattgtccattaatgatgaaatagatattgcacaaacacatgcccatgtaagatcc
aaggcagattcttcagcaggaacttcaagagcacaaacttgtgaagttgacatcttaacc
gatgatgaaatggatattgcacagccatatactcatccaaaatccaaggaacatttttca
gcaggaacttcaagagcacaaacttgtatggtttttaacaaccataatatcctttactgt
tgtgtccgtgacatttcacaaagtcttggccacaaattgacaggtcacgttgatcttgag
aggtctcgttttaagaaatttcgctcttccagtgatggatacaccttaactccacgttca
tccagttctagtcatgccttcaaagactgctcatcttctgtatgtaacccatttgcgttc
actagattgttagctgtatggtgtgatcttgatcaggctcaaacttttcatggtcttatt
ggcatgatctatgaggttctggatagagagaagagaagaactcttagtactgcctggaaa
caacttgaacaagaaggattcaaccagctgagcttcacaggagctatggatatcaatccc
cacgtccaattcatggttacacagttagcttcaggtggaactataaatgctccacgcctt
cctccccttacatttggagagaagtttgaggaagtatatcaagtgatcatgattctggat
gatcgagaacagtttgcaactaatgggaaaaaaattgaaaacatatgctctagatacgag
atcaagattgaggttagaagattaccagttggggattgtatctggattgctcgtcataag
tatcttggaactgagtatgttctggactttattgttgagagaaaaagcgttgatgatatg
cgctcatcaatcatagatggtcgctacagagaccaaaaacttagacttcagagatcagga
ctcaggaagctgatgtacattcttgaaggggatccaaaccagtctgaagcagcagaaatc
atcaaaacggcttgtttcacgacggagattctagatggatttgatgtgttaaggtcaagt
gggcttaaagatacgctaagaaattatagtgatctcactaaatcaatacaccaatactac
aagtcacgggtgaatggtgaccagaacaaagttgtggcctcgtgcccttcttttgatagt
tttgtgaaaaggtgtcaagaccttgagaaaatgacggtcagcgatgtgtttgccattcag
ctcatgcaggtccctcaagtaacggaggaaattgctatagctgttgttgatatgttcccg
acacttgtgtctcttgcttctgcctattctaatctagatgggaataagccggcgcaagaa
gagatgttgaggaaccgaagcaagaatgtaatatgtggaacagctagtaagaatatattc
aaactagtttggagtgaatga
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