Raphanus sativus (radish): 130502049
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Entry
130502049 CDS
T06014
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130502049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130502049
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130502049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
130502049
NCBI-ProteinID:
XP_056852849
UniProt:
A0A9W3CN35
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MSSFNPFSTPQQPQQTPQSPFQTPQQTPQPPFQTPQQVSQPQSNSFFSQQPQSTSFFSQP
QPQQQQQPPTFQPQQLLYLFTNDKAPASYSTEWTDLHPDSQNLLLEIEKKIMEYRTESQR
LDQSSRLFDSSISTQGFESVASRIVQELGGISTTMDRQKAVLHELMLVVKDLLRNSEVAV
GSFMMLQPSGGGGGAVVVSGGDSQQPQAQGVQQEEVQVSYFYRGIPKKPTAFLLQTVVRF
EKYLGECRQWVEEVEQLLALDSDKYSRRVLVLESLPKVMSNVHDFFVHVAAKVENVHQYI
ESMRRAYLADQRRRGESNDPFLEADRRERAKQEAAAKRVHPTLHLPPAATTTTSTQTSTQ
VAGLITYSAATPEVSNSPQTPPANFPTSGAGLFPDTLASAPSISIFATPHTPVFGAPPTP
RSLFGEQTPSNPATPSQFVSGLTPGSGANLSSMKRPSRSKYRTSRR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttcaatccattctctaccccacagcaaccgcaacagactcctcaatcaccg
tttcagactccgcagcagacgcctcaaccaccgtttcaaactccgcaacaggtatctcag
ccgcagagcaactccttcttctcgcagcaaccgcagagcacttccttcttctctcaaccg
caaccgcagcaacagcaacaaccaccgacgtttcagccgcagcagctcttgtatttgttc
acgaacgataaagctccggcgagttacagcaccgaatggactgatctccatcccgattct
cagaaccttctccttgagattgagaagaagataatggagtacagaaccgaaagccagagg
ttagaccaatccagccggctttttgattcttctatatccactcaaggtttcgagtctgtt
gcaagccgcattgttcaggagcttggtgggattagtactaccatggacagacagaaagct
gttctccacgagcttatgctggttgttaaagatctgcttcgtaattcagaggttgcggtt
ggttctttcatgatgctacagccaagtgggggaggaggaggagctgttgttgtcagtggt
ggtgattctcagcaacctcaggcgcagggagttcaacaagaagaagttcaagtttcttac
ttttaccgtgggatcccaaagaaacctactgcttttctgctgcaaacagttgtgaggttt
gagaagtatctaggcgagtgcagacagtgggttgaggaggtggagcagttgctcgctttg
gattctgacaagtatagtcgacgtgttttggttttggagtctcttccgaaagtcatgtct
aacgtgcatgacttctttgttcacgtggctgctaaggtagagaatgttcaccaatacatt
gaatcaatgagaagagcgtatcttgctgaccagcgacggagaggagaatccaatgatccg
tttcttgaggctgataggagggaaagagcaaaacaagaagctgctgctaagagggtccac
ccaactctgcatctacctcctgctgctaccactactacaagtacacaaacctcaacacaa
gtagctgggttaattacgtactcagcagcaactccagaggtttcaaattctccacagaca
cctccagctaattttccaacatcaggagctggcttgtttcctgacacacttgcttcagca
ccttcgatttctatctttgctacaccacatacaccagttttcggtgctccaccaactcct
agatctttgtttggcgagcaaactccatcaaatcctgctacgccttcgcagtttgtctca
ggtcttacacctggttcaggagcaaatttgagttctatgaaaagaccttcaaggtccaag
taccgaacttcgcgacgttag
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