Raphanus sativus (radish): 130502468
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Entry
130502468 CDS
T06014
Name
(RefSeq) eukaryotic translation initiation factor 5B-like isoform X1
KO
K03243
translation initiation factor 5B
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rsz03012
]
130502468
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-5
130502468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
130502468
NCBI-ProteinID:
XP_056853244
UniProt:
A0A9W3CP38
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MDRENTSACGGDENHPFALSSKGSENPNKVVITGKKKKGKKVCKPHKEEKDDHEIAFSGE
DKLKSKNVGFASFDLLGVEDDDISAEVCDELILGRQVTEETNTKSEDAGGTSRSKKKKNK
SGKTAHEEEDLDKILAELGITPVSPAQPELVAPADGSKDEGEEETVLSVSAKKRKKKKDK
DKDKKVSASSMEEAKEEPSQHQKKVPKHVLEMQEMVARRKEAEEMKKKEEEEKFRKEEEE
RRMQEEREREAEEIKQKRKMRAKEKLQKKKQEGGILTEKQKRDKAFKNKILSDAGMLLAS
DKNSDSSKRPVYGNKRKPARGKANDSASEVVPTLHEGDSTELDKKQEAGDEEDDWEAKSD
DSVDIMGDYDDDGEDVPWLVVKKEIKETASKAHCSGFNAGPVTDTLALKAGVSCRPQKSI
PNVDDATRPKDANVSVVNEVVEESLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGI
TQQIGATYFPAENIRERTKELKPDAKLKVPGLLVIDTPGHESFSNLRSRGSNLCDIAILV
VDIMHGLEPQTIESLNLLRKRNTEFIVALNKIDRLYGWKTSKNAPIEKALALQSKDVVIE
FNMRLTHVITQFKEQGLNTEIYYKNREMGDTISIVPTSAISGEGIPDLLLYLVMWSQKTM
VEKLTFVDKVQCTVLEVKVIPGHGTTIDVVLVNGVLHEGDQIVACGSQGPIVTTVRSLLT
PHPMKELRVKGTYLHHREVKAAQCIKITAQGLEHAVAGTSLHVIGPDVDVEEAKKTAMED
MKSIMSWVDKSGEGVYVQASTLGSLEALLEFLKSPDVKIPVSGIGLGPVHKKDIMKAGVM
LEKKKEYATILAFDVKITTEARELADNMGVKIFCADIIYHLFDQFKGYVKDVRDEERKET
AAEVVFPCVLKILPDHVFKRGDPIILGVEVIDGILKVGTPMCFLKEIEKSRVFVDLGRVA
SIHKDKKPLEDAKKGQQVAIKIIASNPGEEKTFGEDFGIEDELVSHISRRSIDILKTLYR
NELKDEFKLVKKLKTLFKIQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggagaacacgagcgcgtgtggtggtgacgaaaatcacccctttgccttgtcc
tccaagggaagtgaaaaccctaataaagttgtgatcactggaaagaagaagaagggaaag
aaagtttgtaaaccgcataaggaggagaaggatgatcacgagattgctttttccggggaa
gataagttgaaatctaagaatgtggggtttgcaagctttgatctgcttggtgtagaggat
gatgatattagtgctgaagtatgtgatgagctaatacttgggagacaagttaccgaagaa
actaatactaagagtgaggatgctggaggaacctctaggagtaagaaaaagaaaaataag
agtggaaagactgcacatgaagaagaggatttggacaagattcttgcagaactcgggatc
actcctgtttcaccagcacaacctgagctagttgcacctgcagatggctcaaaggatgaa
ggagaagaagagacagtcctgtcagtttcagcgaagaaaaggaaaaagaagaaggataag
gacaaggacaagaaagtatctgcttcttctatggaggaggctaaggaggagccatcacag
caccagaagaaagttcctaaacacgttctagagatgcaagagatggttgcgcggagaaag
gaagcagaggagatgaagaagaaggaagaggaagagaagtttaggaaagaggaagaggag
cgacgcatgcaggaagagcgagaaagagaagccgaagagattaaacagaagagaaagatg
agggctaaggagaagctgcagaagaagaagcaagagggagggattctaacagaaaagcag
aagagggacaaggctttcaagaacaagatattgtctgatgctggtatgcttcttgcttca
gataagaacagtgattcctcaaagcgtcctgtttatggcaacaaaagaaaaccagctcgc
ggaaaagcaaacgactctgcttcagaagtagtacctactttgcatgaaggagattcaact
gagctggataagaaacaagaagctggtgatgaggaggatgattgggaagcaaaaagtgat
gattctgttgatataatgggtgattatgatgatgatggtgaagatgtaccttggcttgtg
gttaagaaagagatcaaagaaactgcttcaaaggcccattgttcaggtttcaatgcaggt
cctgtcactgatacactagcattgaaggctggagtttcatgcaggccacaaaaatctata
cctaatgtggatgatgctactaggccaaaagatgctaatgtctcagtagttaatgaagtt
gttgaagaaagtcttcgctctcccatttgctgcatcatgggccatgttgatactggcaaa
actaagctcttggactgcatcagaggaacaaatgttcaggaaggagaagcgggaggtatc
actcagcagattggtgcaacttacttccctgcggaaaacatccgtgagaggaccaaggag
ttaaaacctgacgcaaaactcaaggtgccaggtctattggttatcgatacacctggacac
gagtcattctcgaatctaaggtcaaggggttcaaacctgtgcgacattgcaattctagtg
gttgacataatgcatggtctagagccacaaaccatagagtctcttaatctgttgagaaag
aggaacacagagttcattgttgccttgaataagattgataggctatatgggtggaaaaca
agcaagaacgctcctatagagaaggctttggcgctgcaatcgaaagatgtggttattgaa
tttaacatgaggctcactcatgttataacccagttcaaggaacaaggactcaacactgag
atttattacaagaacagagaaatgggagatactatcagtattgtgcctactagtgctatt
agtggggaagggattccagatctgttgctatatttggttatgtggtctcagaaaacaatg
gttgagaaacttacatttgttgacaaagtgcagtgtaccgtccttgaggtcaaagttatt
ccaggtcatggcacaacaattgatgttgttttggtcaacggggtactccatgaaggtgat
caaatcgttgcttgtgggtcacagggaccaattgtaacaactgttagatcattattgact
cctcatcctatgaaagagctacgtgtgaagggtacatatctgcatcatagagaagtaaag
gctgcgcaatgtatcaagattactgcacagggacttgaacacgccgtagctggtacttcc
ttacatgtgattggacctgatgtggacgtggaagaagccaagaaaacagccatggaagat
atgaagtcaataatgagctgggttgacaaaagcggtgaaggagtttacgtacaagcttca
acactaggatctctggaagcattgctagaattcttgaagtcaccggatgtgaaaataccc
gtcagtggtattggcctaggacctgtgcataagaaggatatcatgaaggccggagtaatg
ctagagaagaagaaagagtatgcaacgattcttgcttttgacgtgaagataactacagag
gctcgcgaactagctgacaacatgggagtcaagatcttctgcgctgatattatctatcat
ctgttcgatcagttcaagggatatgtcaaggatgtcagagatgaagaaaggaaagaaaca
gcagctgaagtagtgtttccatgtgtacttaagattttaccagaccatgtcttcaaaaga
ggagacccaatcatccttggagtcgaagtcatcgatggtatactcaaggttggtaccccc
atgtgctttctaaaagagattgagaagtcgagagtgtttgtggatcttggtcgcgttgca
tctattcataaagacaagaagccacttgaagacgccaagaaaggacaacaggttgctatc
aaaatcattgcctctaaccctggagaagagaaaacgtttggagaggactttggtatagaa
gacgagcttgtcagtcatatttcgaggcgatccatcgacatactcaaaacactctacagg
aatgagttgaaggacgagtttaagcttgttaagaaacttaaaacgctgttcaagatacaa
tag
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