Raphanus sativus (radish): 130502646
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Entry
130502646 CDS
T06014
Name
(RefSeq) two-component response regulator ARR1-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130502646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
130502646
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
130502646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
130502646
NCBI-ProteinID:
XP_056853380
UniProt:
A0A9W3CPE5
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MMNPLNGRGGGLGGSSSGKNQGGESVVEMFPSGLRVLVVDDDPTCLVILEKMLRTCLYEV
TKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSV
VLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRIEWSMPTTTHSGSVEETTGERQQQQQ
QQQREAVSADDDDNNSSSVNEGNNNNNNWRSSSGSSSRKRKDEEGEEQGDEEDASNLKKP
RVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGV
SQHHQGSLNNSFMTGQDASFGSLPTLNAFDLQALGQLPAQSLAQLQASGLTRPAALVSKP
GFPGGSTTIVDERSIFSFDNSKMNLLHGVPTGMEPRQLAGLQQQHGMTIQQQIAAVRAGH
SLRRPQQQTFSRPQQSSSIRQPMLPNRVSEISGFSSGRSSSIPESSSRVLPTSYANLSTQ
QQSLAFSNFQQELPVNSFPLASAPGLLSLRKPHSSASEVNSSEAGFTTSSYDMLFSSRQN
DWDLRSMLSSSHQDAFSNSEAYSSSRNNNNTSRNQQQQQQQQGMVSHHQVYGNGGGSSLK
VKSETMAFHEQYSNQEDLMSALLKQEGIGPVDTEFDFDAYSIDDIPV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcctcttaacggaagaggaggaggactcggtggatcgagttccggtaagaat
caaggcggagagtcagtggtggagatgtttccttcgggtcttagagttcttgtcgttgac
gatgacccgacttgtcttgtgatcttagagaagatgctcaggacttgtctttacgaagta
acgaaatgcaacagagcagagatggcattgtctctgctccggaagaacaaacacggattc
gatattgtcatcagcgatgttcacatgcctgacatggacggcttcaagcttcttgaacac
gtcggtcttgagatggacttgcctgttatcatgatgtctgcggatgattcaaagagtgtt
gtcctaaaaggagtcacgcacggcgcggttgactacctgatcaagcctgtacgcatggag
gcgcttaagaatatatggcagcacgtggttcggaagaggaggatcgagtggagcatgcct
actactacacattccggaagcgttgaggagacaaccggcgagaggcagcagcagcagcag
cagcagcagagagaagctgtttccgctgatgatgatgacaacaactcttcctctgtcaac
gaagggaataataacaacaacaactggaggagcagcagcggcagcagctcgcggaagcgg
aaagatgaggaaggtgaagagcaaggtgacgaggaagacgcttccaatctcaagaagccg
cgtgttgtctggtccgttgagttgcatcaacagtttgttgctgctgttaatcagctcggc
gttgaaaaggcggttcctaagaagatattggagctgatgaatgttcctggtcttacaagg
gagaacgtagccagccacctccagaaatacagaatatatctaagacggcttggaggagtg
tcacagcaccaccaaggaagtttaaacaactcgtttatgacgggtcaggacgccagcttc
ggttctcttcccactctgaacgcgtttgatcttcaagcgctaggtcagcttcctgctcag
agccttgcacagcttcaagcatctggtctaacccggcctgctgcgttggtctctaagcca
gggttccctggtggttccaccaccattgtggacgagagaagcatcttcagcttcgacaac
tccaaaatgaacttgctccacggtgtcccgaccggtatggaaccaagacagcttgctggc
ttacaacaacaacatggaatgacgattcaacaacagattgccgctgtaagagcaggacat
agccttcggaggcctcagcagcaaacattctcacgaccacaacaatcatcatccatcagg
cagccgatgttaccaaaccgtgtctctgagataagtggtttctcttcgggaaggagcagc
agtatccctgagagcagcagcagagtgttacccacaagctatgccaacctctcaactcaa
caacagtcgctggccttcagcaacttccaacaagaactccccgtgaacagcttcccgcta
gcgagtgcaccaggcttattatctcttcggaaaccacattcttctgcttccgaggttaac
agctcggaagcaggtttcaccacatctagctacgacatgttgttctcaagtagacagaac
gattgggatctgcggagtatgctttcttcctctcatcaagacgcgttttccaattcagaa
gcctactcttcttcaagaaacaacaacaacactagccggaaccagcagcagcagcagcag
cagcagggcatggtctcgcatcaccaggtttatggaaacggagggggaagctccctgaag
gtgaagtcagagacgatggcgttccacgagcagtatagtaatcaagaagatcttatgagc
gcacttcttaagcaggaaggtattggaccggttgataccgagttcgactttgatgcgtac
tcgattgatgacatcccggtttga
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