KEGG   Raphanus sativus (radish): 130503559
Entry
130503559         CDS       T06014                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    130503559
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    130503559
Enzymes [BR:rsz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130503559
Protein phosphatases and associated proteins [BR:rsz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130503559
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130503559
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 130503559
NCBI-ProteinID: XP_056854159
UniProt: A0A9W3CRW6
LinkDB
Position
Unknown
AA seq 1200 aa
MICIFFNANMEKDMRCFFIMLIMGTELMRICVKEESDELPSVPPGFESYATFTLKKRLVP
PDVAAPAMERFASVSNQAELETESDEAKAARSLRRRPWINYDDDAAADPNNEKKASPQNL
DQNCGVKSPPSLPKGVTRGCAECNDCQKVTARWHPDEARRPDLEDAPIFYPSEEEFEDTL
SYIAKIRPKAEKYGICRIVPPSSWKPPCPLKEKQVWEGSKFNTRVQRVDKLQNRSSMKKT
SKLSNQMRRKKRKCMKMGMDSGDPGSASPGMSELETFGFEPGPAFTLKDFKKYADEFKAQ
YFKKSETSTDSECKAGDSMDSWEPAVEDVEGEYWRIVDKATEEIEVLYGADLETGVFGSG
FPKISSSHEASSSDEKYAKSGWNLNNFSRLPGSLLKHEASDISGVLVPWLYIGMCFSSFC
WHVEDHHLYSMNYMHWGAPKLWYGVAGKDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQLS
PSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLPHGQIAIEL
YSQQGRKTSISHDKLLLGAAREVVKADWELNLLKKNTTDNLRWKEFSGKDGILAKTLKAR
IDMERTRRDFLSSSSLALKMHSNFDATNERECCICFFDLHLSAAGCRCSPEKYSCLTHVK
QLCSCPWVTKYYLFRYDMDELNVLLEAVEGKLSSVYRWARQDLGLALSENLSGSKMEIDE
EEPQQAAALLGKDLQMKATSREDLSRRLEKTSKLLEVKEEQLTTPNHCMKPVKEETVYDS
SVPVCQPSEGGISVSAAGKKNPQSVPDNVILLSDDEHEIPRKRVSPGKHLKIRERPPTHV
LALEATSKTPVPVLEKQPNSVPDRRNTISLPTTSDQRAVQGDVPTSVSPAEVNTVADGLA
LVTSNIDGVKPTSCKSKTSGGLGIVDVVDGIRSNSGTPSCSQNNSPDRIIRQKGPRIAKV
VRRINCNVEPLNYGCVLSGKSWCNRQAIFPKGYRSRVRYINILDPTRMSFYISEILDAGR
NSPLFMVHLEGNPSEVFAHLSPTRCWEMVRDRVNQEISKQHKAGKLDLPPLQPSGSPDGF
EMFGYTSPAILQAIEALDVNRVCTEYWDSRPYSRPQVQFLANPLLREANKTTSIQSSSDV
RNLQKAPGRRLLLPAGTNSTLKVLLKKANMEELSSLQEVLSESNIDLVTELVKEEIQKRR
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgatttgtattttttttaatgcaaatatggaaaaggacatgcgatgtttcttcatcatg
ttaataatggggacagagctgatgagaatctgtgtgaaagaagaaagtgatgagttgcca
tctgttcctcctgggtttgaatcatatgctactttcactttaaaaaaaagacttgtccct
cctgatgttgctgctcctgcaatggagaggtttgcttctgtatcaaatcaagctgagttg
gagactgaatccgatgaagccaaagctgctcggtctctacggcgtagaccttggattaac
tatgatgatgatgctgctgctgatccaaacaatgagaagaaggcctcgcctcaaaatctt
gatcaaaattgtggagtgaagtctcctccttctctaccaaagggtgtgactagaggatgt
gcagaatgtaatgactgccaaaaggtaactgcgagatggcatccagatgaagctcgtagg
cctgaccttgaagatgcccctatattctacccgagcgaggaggagtttgaagacactttg
agctacatagctaaaataagacccaaggctgagaagtatggaatctgccgcattgttcct
ccttcttcctggaaaccaccgtgccctctgaaagaaaagcaagtgtgggaaggttctaaa
ttcaacacacgtgtccaaagagtggataaacttcagaaccggagttcgatgaagaagact
tcaaagctttctaatcaaatgagaaggaagaagagaaagtgcatgaaaatgggaatggat
tctggcgatcctggctctgcaagtcccggaatgagtgaacttgagacgtttgggtttgaa
cctggtccagcgttcactctaaaagacttcaaaaagtatgctgatgagttcaaggctcag
tactttaaaaagagtgagacttctacagacagtgaatgtaaagctggtgactccatggac
tcctgggagccagcagttgaggatgttgaaggtgaatattggcggatagtagataaagca
accgaagagatagaggtgctatatggtgctgaccttgaaactggggtgtttggtagcgga
ttccccaagatatcatcaagtcacgaggcttcttcttcagacgaaaaatatgcaaaatcc
ggctggaacttaaataatttctcaaggcttccaggatcccttcttaagcatgaggccagt
gatatctctggtgtccttgtgccgtggttgtatattgggatgtgtttttcttctttctgc
tggcatgtggaagatcaccacttgtattcgatgaattacatgcactggggtgctccaaaa
ctgtggtatggtgttgcggggaaggatgctgttaaactagaggaggcgatgagaaagcat
ttgcctgaccttttcgaagaacagcctgatttgcttcataagctagttacacaactctcc
ccgtcaaaactgaaaaccgcaggagtacctgtgcaccgttgcgtccagcatgccggagag
tttgtcttgacttttcctcgggcatatcatgctggatttaattgtggtttcaactgtgct
gaagctgtgaatgtagcgccagttgactggctgcctcatgggcagattgctatagaatta
tacagtcagcagggtagaaaaacgtccatctcgcatgataaactgttgcttggggcagca
agagaagtagtgaaagccgactgggagctaaacttgctaaagaagaatacaacagataac
ttgaggtggaaagagtttagtggaaaggatgggatcttggccaaaacactcaaggcacgc
attgacatggaacgtacaagaagagattttctgagcagctcctcacttgcattgaagatg
catagtaatttcgatgctaccaacgagagagagtgttgtatatgcttctttgatttgcac
ctctccgcagctggttgccggtgttccccagagaagtactcatgcttgacacacgtgaag
cagttgtgttcgtgtccttgggttactaaatattatctatttcgctatgatatggatgaa
ctgaatgttcttctcgaggctgtggaaggaaagcttagttctgtgtatagatgggcgcgt
caagatttaggattggctttaagtgaaaacctctcaggaagcaagatggagatagatgag
gaagaaccacaacaagcagctgcacttttagggaaagatttacagatgaaagcaacatcg
agagaagatctaagcagacggttagaaaagacgagtaaattattagaagtcaaggaggag
cagttaacaacaccaaaccattgtatgaagccagtcaaagaagaaactgtttatgattct
tctgttccagtttgccaaccatctgaaggaggcatctctgtgtcagctgctggaaaaaag
aatccacagagtgtacctgataatgtgatactcctcagtgatgatgagcacgagatacct
aggaaacgagtttcgccaggcaagcatttaaaaatacgggagagaccaccaacccacgtt
ttagcgttagaagcgactagtaaaacccctgttccagttttagaaaagcaaccaaattct
gtgcctgatagaagaaacacaatatcattgcctactactagtgaccaaagagcagtgcaa
ggggatgtaccaacttctgtatctcccgcggaagttaataccgtagctgatggacttgca
cttgttactagcaacatagatggcgtaaaacctactagctgcaaatccaaaacctcagga
ggtttgggtatagtggatgtggttgatgggataagaagtaactcaggtacaccgtcttgt
tcacagaataatagtccggataggatcatccgccaaaagggtccacgtatagcaaaagtt
gtgaggagaatcaattgcaatgtagagcctttaaactatggatgtgtgctttctggaaaa
tcatggtgcaaccgccaagcgatttttcctaaaggataccgtagtcgggtcaggtacata
aatattttggatccaacaaggatgagcttctacatttcagaaattcttgatgctggacgc
aatagtccgttgttcatggttcacttggagggtaatcccagtgaggtgtttgctcacttg
tcgcctacaagatgctgggagatggtaagagatagagtaaaccaagagataagtaagcag
cacaaagctggtaagctagatcttcctcctctgcagccctctgggagtcctgacggtttt
gaaatgtttggatatacttcacctgcaatcctacaggctattgaagcgttagacgtgaat
agagtttgcacagagtattgggactccaggccttattcgcggccacaagtgcagttcctt
gcaaatcctcttctcagagaagccaacaagacaacaagcatacaatcatcatcggatgtg
agaaatctccagaaagctcccggacgtcgtctgttattacctgctggaacaaactccact
ctcaaagttctgcttaagaaagctaacatggaggaactaagctcacttcaagaggtttta
agtgagtctaacatagatttggtgaccgaacttgtgaaggaagagatccagaagcggcgc
tga

DBGET integrated database retrieval system